Gene Franean1_4928 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4928 
Symbol 
ID5673268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5917604 
End bp5918137 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content72% 
IMG OID641243783 
Producthypothetical protein 
Protein accessionYP_001509199 
Protein GI158316691 
COG category[R] General function prediction only 
COG ID[COG3467] Predicted flavin-nucleotide-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.52831 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.121155 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGGA CCGACGCTCC TGCTCCGGCG ACCATCGGCG CTCCGCTGGG CTCCGGTGCT 
GCGCAGCGCA CCAGCGACCG GGGGAGCATC CCCCGGTCGG GCATCCCGCG TGACCACGCC
GGCTTCGGCG TCCTGACCTT CGACATCTGC GTGCGGCTCG TCGCCGGCGA GCGGATTGGC
CGGGTCGCGT TCGTCGCGGA CGGCGAGATC CTGGTGCTCC CCGTGAACTA CATCGTGGAC
GGCAACACCG TCGCGTTCCG GTCCCGGGTG GGCTCGAAGC TGTCCGCCGC CACCAACCAC
AGCGTCGTCG CCTTCGAGGT GGACGGCTAC GACGCCACCG TCGGCGTCGG CTGGAGCGTG
CTGATCAACG GGTGCGCGGA GGCCGTCCGG GAGGACGCGG AGATCGCCCG GCTCGAGGCC
AGCGGGCTGG CTCCCTGGTC GGTGAACCTG GAGCGGCCGA GCTGGGTCCG CATCCACTGG
GACTCGGTCT CCGGGCGGAC CACCATGCGT CCGCCGACCG CCGACGAGTG CTGA
 
Protein sequence
MTRTDAPAPA TIGAPLGSGA AQRTSDRGSI PRSGIPRDHA GFGVLTFDIC VRLVAGERIG 
RVAFVADGEI LVLPVNYIVD GNTVAFRSRV GSKLSAATNH SVVAFEVDGY DATVGVGWSV
LINGCAEAVR EDAEIARLEA SGLAPWSVNL ERPSWVRIHW DSVSGRTTMR PPTADEC