Gene Franean1_4886 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4886 
Symbol 
ID5673226 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5861940 
End bp5862944 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content76% 
IMG OID641243741 
Producthypothetical protein 
Protein accessionYP_001509157 
Protein GI158316649 
COG category[L] Replication, recombination and repair 
COG ID[COG2887] RecB family exonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.335853 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACAA CGCCTGACCA GGCCCCGGGC TCGGCCGCCG AAGGTTGCCC GACCGGGCCG 
GTCCAGGTCG GGCCCGGCTG GCATGAGGGC CGCGACCCCG CGGCGGCCCC GGCCTCGCCG
CCGACGCCAC CGGCCGCGGC GCCACAGGCG CCGCCGATAA CGGCGTCGTT ATCCCCCTCC
CGGGCCGCCG ACTTCGTCAA CTGCCCGCTG CGCTACCGCT TCCGCGTGGT CGACCGGCTG
CCGGAGGCGC CGAGCGAGGC GGCGACGCGG GGCACGGTGG TGCACGGCGT GCTCGAGCGG
CTGTTCGACC TGCCCGCCCG GAGCCGGACC CAGCCGGCCG CGACCGAGCT CGTCGAGCCG
GTCTGGGCCG ACCTGCTCGC CCGCGACCCG GCGCTCGGTG GCCTGTTCGA CGACGACGGC
GCCCTGCGCT CCTGGCTGGA CAGCGCGCGT GACCTTCTCG CCGGCTACTT CACCCTCGAG
GACCCGACCA GGCTGGCCCC GGCCGCCCGG GAGCTCTACG TCGAGCATGT CCTGGCCTCC
GGGCTGCGGC TGCGCGGCTA CGTGGACCGC CTCGACTCGG CCGAGACCCC CCAGGGCACC
GCGCTGCGCG TCATCGACTA CAAGACGGGC CGCTCCCCCG GCCCGGCGTT CGAAGGCGCG
GCCATGTTCC AGATGCGGTT CTACGCGCTC GTGCTATGGC GTTCGCGTGG CGTCATCCCG
CGCGAGCTCC GGCTCTATTA CCTGAGTGAC CGAACCTGGC TGCGTGCCAC GCCGGAGGAG
TCGGAGCTGC GCGCCACCGA GCGCCGGATC GAGGCGCTGT GGGCGGCCAT CGCCCGGGCG
CACCGGACGG GCGACTGGCG GGCCACGCCG GGCCGGCTGT GTGACTGGTG CGATCACAAG
CCGAGGTGCC CGGCATTCGG CGGCACCCCT CCCCCGCTGC CGGAGAACCG CGCGGAGCTG
CCCGTCGACG ACGCCGCCCC CACCGTCTGC GAGGCGGACG GCTGA
 
Protein sequence
MTTTPDQAPG SAAEGCPTGP VQVGPGWHEG RDPAAAPASP PTPPAAAPQA PPITASLSPS 
RAADFVNCPL RYRFRVVDRL PEAPSEAATR GTVVHGVLER LFDLPARSRT QPAATELVEP
VWADLLARDP ALGGLFDDDG ALRSWLDSAR DLLAGYFTLE DPTRLAPAAR ELYVEHVLAS
GLRLRGYVDR LDSAETPQGT ALRVIDYKTG RSPGPAFEGA AMFQMRFYAL VLWRSRGVIP
RELRLYYLSD RTWLRATPEE SELRATERRI EALWAAIARA HRTGDWRATP GRLCDWCDHK
PRCPAFGGTP PPLPENRAEL PVDDAAPTVC EADG