| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4882 |
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| Symbol | |
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| ID | 5673222 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 5856509 |
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| End bp | 5858314 |
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| Gene Length | 1806 bp |
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| Protein Length | 601 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641243737 |
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| Product | ATPase central domain-containing protein |
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| Protein accession | YP_001509153 |
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| Protein GI | 158316645 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG1222] ATP-dependent 26S proteasome regulatory subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000159946 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.231188 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCCGGTC CCCGTTCGGG CTCTGGCTCC GGTGGGAGCA CGGGTCGTCC TGGTGACGCC
GATTCTCAAC GGTCGGCGTA CGAGAAGGAA GTACACGAAC TCACGACTCA GGTCACCTTC
CTGGAGGAAG AAGTGGCCAT GCTGCGGCGG AGGCTGTCTG AATCGCCCCG ACAGGTACGT
GTCCTGGAGG AGCGACTAGC CCAGGTACAG GTGGAGCTAC AGACCGCCAC TGGGCAAAAC
GACAAGCTCG TCGCCACCCT TCGGGAGGCA CGTGACCAGA TCATCTCGTT GAAGGAGGAG
GTCGACCGGC TCGCGCAACC GCCGAGCGGG TACGGCGTCT TCATCCGTGG CTACGACGAC
GGCACGGTCG ACGTGTTCAC GCAGGGCAGA AAGCTCCGCG TGACGGTGTC GCCGAACGTC
GAAGCCGACG TCCTGCAGCC CGGTCAGGAG GTCATGCTCA ACGAGGCGCT CAACGTCGTG
GAGGTTCGCG CGTTCGAGCG GCAGGGCGAG ATCGTCCTGC TCAAGGAGGT CCTCGAGAGC
GGTGACCGGG CGCTGGTGAT CGGTCACACC GACGAGGAAC GGGTCGTCAT GCTGGCCCAG
CCACTCCTCG ACGGCCCGAT CCGAGCCGGC GACTCGCTCC TCATCGAGCC ACGGTCGGGG
TACGCCTTCG AGCGGATCCC CAAGTCCGAG GTCGAGGAGC TGGTCCTCGA AGAGGTCCCA
GACATCGGCT ACGAGCAGAT CGGCGGCCTG AAGGGCCAGA TCGAGTCGAT CCGCGACGCG
GTCGAGCTGC CGTTCCTCTA CAAGGAACTG TTCCTGGAGC ACAAGCTCAA GCCACCGAAG
GGCGTGCTGC TCTACGGCCC GCCCGGCTGT GGCAAGACGC TGATCGCCAA GGCCGTGGCG
AACTCCCTGG CCAAGAAGGT CGAGGCACAG ACAGGCCAGG GCTCCGGCCG GGCCTTCTTC
CTCAACATCA AGGGCCCGGA GCTGCTCAAC AAGTACGTAG GCGAGACCGA GCGGCAGATC
CGGCTGGTGT TCCAGCGGGC GCGCGAGAAG GCGTCCGAGG GCATGCCGGT GATCGTGTTC
TTCGACGAGA TGGACTCGAT CTTCCGGACC CGTGGCTCGG GTGTCTCCTC GGACGTGGAG
AACACGATCG TCCCGCAGCT GCTCAGCGAG ATCGACGGCG TTGAGCAGCT CGAGAACGTC
ATCGTGATCG GCGCGTCCAA CCGAGAGGAC ATGATCGACC CGGCGATCCT GCGGCCGGGC
CGGCTCGACG TGAAGATCAA GGTCGAGCGT CCGGACGCCG AAGCGGCCAA GGACATCTTC
GCCAAGTACG TCCTGCCCGA GCTCCCGCTG CACGCCGACG ACCTCGCCGA GCACGGAGGT
AACCGGGAGG CGACCTGCCA GGGCATGATC CAGCGGGTCG TCGAGCGGAT GTACGCCGAG
AGCGAGGAGA ACCGCTTCCT CGAGGTCACC TACGCCAACG GTGACAAGGA GGTCCTGTAC
TTCAAGGACT TCAACTCGGG CGCGATGATC GAGAACATCG TGGCCCGGGC GAAGAAGATG
GCGGTGAAGG ACCTCATCGA GAGCGGAGTC CGCGGCCTGC GCATGCAGCA CCTGCTGTCG
GCGTGCCTGG ACGAGTTCAA GGAGAACGAG GACCTGCCGA ACACCACGAA CCCGGACGAC
TGGGCCCGGA TCTCCGGCAA GAAGGGTGAG CGGATCGTCT ACATCCGCAC ACTCGTCACC
GGAACCAAGG GCACCGAGGC CGGGCGGTCG ATCGACACCA TCGCGAACAC CGGCCAGTAC
CTCTAG
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| Protein sequence | MSGPRSGSGS GGSTGRPGDA DSQRSAYEKE VHELTTQVTF LEEEVAMLRR RLSESPRQVR
VLEERLAQVQ VELQTATGQN DKLVATLREA RDQIISLKEE VDRLAQPPSG YGVFIRGYDD
GTVDVFTQGR KLRVTVSPNV EADVLQPGQE VMLNEALNVV EVRAFERQGE IVLLKEVLES
GDRALVIGHT DEERVVMLAQ PLLDGPIRAG DSLLIEPRSG YAFERIPKSE VEELVLEEVP
DIGYEQIGGL KGQIESIRDA VELPFLYKEL FLEHKLKPPK GVLLYGPPGC GKTLIAKAVA
NSLAKKVEAQ TGQGSGRAFF LNIKGPELLN KYVGETERQI RLVFQRAREK ASEGMPVIVF
FDEMDSIFRT RGSGVSSDVE NTIVPQLLSE IDGVEQLENV IVIGASNRED MIDPAILRPG
RLDVKIKVER PDAEAAKDIF AKYVLPELPL HADDLAEHGG NREATCQGMI QRVVERMYAE
SEENRFLEVT YANGDKEVLY FKDFNSGAMI ENIVARAKKM AVKDLIESGV RGLRMQHLLS
ACLDEFKENE DLPNTTNPDD WARISGKKGE RIVYIRTLVT GTKGTEAGRS IDTIANTGQY
L
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