Gene Franean1_4832 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4832 
Symbol 
ID5673173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5771179 
End bp5772042 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content70% 
IMG OID641243688 
Productmethyltransferase type 11 
Protein accessionYP_001509104 
Protein GI158316596 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0563647 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0172807 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCATC CCACGAGCGC GCTCGCGGCA GAGGTCGGGA AGTTCTACGA CCACCTCACG 
ACCTACCAGA CCGCGCAGGA CGAGGATCTC AACTTCCACT TCGGCTACTG GGACGTGCCG
CCCGACGGCA CCCCGCCCGC CCCCGGCACG GACGTCGCCG AACTCGAGGC GGCGGCCGAG
CGCCTCACCG AGTTGATGAT CGAGAAGATC CGGGTCCGGA CCGGGGACCG GGTGCTCGAC
GTGGGATCGG GCTCCGGCAT CCCCGCCGTC CGCCTGACCC GGGCTACCGG AGCTTCGGTC
GTCGGGATCT CGATCAGCCG GGAGCAGGTG CGGCGCTCGA CCGACCGGGC GCGCGACGAG
AACCTCTCCG ACCGGCTGGA GTTCGAGTAC GCCGACGCCG CGGAGCTTCC CTTCGGTCCG
GATTCCTTCG ACGCCGCCTG GGCGCTGGAA TCCATCATTC ACGTCCCCGA CCGCGCCCAG
GTGCTGCGGG AGATCGCCCG GGTCATCCGG CCGGGCGGCC GTTTCGTCGC CACCGACATC
TTCGAGCGGT CGCCGGTCCC GGACGAGAAG CGGCACGCGG TCGACAGCTT CTATTCCGGT
CTGCTGCTCG GTCCGAGTGT TCGGTTCGAC GACTATCCGG CGCTGCTGCG CGGGGCGGGG
CTGCGCCCGC TGGAACTCAT CGATGTCAGC GACCAGGTGA TCGCGCGGTC GTTCCAGCTG
CTCGCCGAGC GGATCCGCCG GGACAAGGAG AACCTCGACG ACCTGCTCGG CGACGAGCTG
TACCAGCGTC TCGCCAGCAC GGGTGTGGAC GGGCTCCGTG AGATCGGCTA CCTCGTCGTG
GTGGCCGAGC GTCCGACCGA GTAA
 
Protein sequence
MAHPTSALAA EVGKFYDHLT TYQTAQDEDL NFHFGYWDVP PDGTPPAPGT DVAELEAAAE 
RLTELMIEKI RVRTGDRVLD VGSGSGIPAV RLTRATGASV VGISISREQV RRSTDRARDE
NLSDRLEFEY ADAAELPFGP DSFDAAWALE SIIHVPDRAQ VLREIARVIR PGGRFVATDI
FERSPVPDEK RHAVDSFYSG LLLGPSVRFD DYPALLRGAG LRPLELIDVS DQVIARSFQL
LAERIRRDKE NLDDLLGDEL YQRLASTGVD GLREIGYLVV VAERPTE