| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4712 |
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| Symbol | |
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| ID | 5673054 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 5626970 |
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| End bp | 5627713 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641243569 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001508985 |
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| Protein GI | 158316477 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.264326 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGCATCC TCGACGGCAA GGTCGCCGTG ATCACGGGTG CGGGGCAGGG TATCGGCAAG
GCCTCGGCGG CGGTGTTCGT GCGCGAGGGC GCCAGGGTGC TCGCCGCGGA CATCAGCGGG
GAGGAGAAGG CGACCGCGGC CGACCTCGGG CCGGCGGTGG TGCCCTTCCA CGTCGACCTC
CGTCAGGAGG TCGAGATCGC CGCCATGATC GACGCCGCGG TGGCAGAGTT CGGCCGGGTG
GATGCCTTGG TGAACGTGGC CGGCACGCCC GCGGGCCGGT CGCCGGAGTT CCTCAGCGCC
GAGGAGTACG AGGTGCAGAC CGCCGTGAAC CTGCGTGGCG TGCTCCTGTG TACCAAGTAT
GCGATTCGGG CGATGCTCGA GACCGGGGGC GGTTCGATCG TCAGCGTGTC GTCGGTGGCC
GGGCTCAACG TCGAGGAGCG GTCGCCGGTG CCGTATCAGA CGGCGAAGGC CGGCGTTCAT
GCCCTTACCA AGGCGGTCGC GGTCGAGTAC GGGCCACGGG GTATCCGGGC CAACGTGATC
GCGCCGGGGT TCACGCTCAC GGAGAAGAAC CGGGAGGCGC CGGCGGACGC GATGCGCTCT
CTGTGCGCGA AGGCGGCGCT CGGCCGGGCG GGGGAGGCGC GCGAGCAGGC CGAGGTGACG
GCGTTCCTCG CCTCCGACCG CGCCTCGTTC GTCACCGGGG TGATCATCGC GGTCGACGGC
GGCTGGTCGG CGCGCCTTGC CTGA
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| Protein sequence | MGILDGKVAV ITGAGQGIGK ASAAVFVREG ARVLAADISG EEKATAADLG PAVVPFHVDL
RQEVEIAAMI DAAVAEFGRV DALVNVAGTP AGRSPEFLSA EEYEVQTAVN LRGVLLCTKY
AIRAMLETGG GSIVSVSSVA GLNVEERSPV PYQTAKAGVH ALTKAVAVEY GPRGIRANVI
APGFTLTEKN REAPADAMRS LCAKAALGRA GEAREQAEVT AFLASDRASF VTGVIIAVDG
GWSARLA
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