Gene Franean1_4653 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4653 
Symbol 
ID5672996 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5552932 
End bp5553480 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content68% 
IMG OID641243511 
Productintegrase catalytic region 
Protein accessionYP_001508927 
Protein GI158316419 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGCAG TGGACTTTTT CCACGTGGAT TGCGCGGTGA CGCTGCGGCG TCTGTACTGC 
TTCTTCGTCA TAGAGGTCGG CTCCCGCTCC GTCCACATCC TCGGGGTCAC CGCCCACCCG
GACGGGCTGT GGACCACCCA ACAGATCCGC AACCTCCTCA TGGACCTCGG CGACCGGGCT
GCCGACTTCC AGTTCCTGAT CCGCGACCGG GCCGGCCAGT TCACCGCGTC GTTCGACGCG
GTCCTCGCCG ACGCCGGCAT CACCGCCGTC ACGATCCCAC CCCGGGCTCC GCGGGCGAAC
GCCTACGCGG AACGGTTCGT CCACACGGTC CGGACCGAGG TCACCGACCG CATGCTGATC
TTCAGTGAAC GGCACCTGCG CACCGTCCTG GCCGAGTACG CCGCCCACTA CAACGGACGA
CGGCCCCACC GCGGCCGCGA CCTTCAACCG CCCCGGCCCG ACCACCCCGT CGCCGACCTG
AGCCAGGAAC GGATCAGGCG CCAGCCCGTC CTCGGCGGCC TGATCAACGA ATACGAACGA
GCAGCCTAA
 
Protein sequence
MLAVDFFHVD CAVTLRRLYC FFVIEVGSRS VHILGVTAHP DGLWTTQQIR NLLMDLGDRA 
ADFQFLIRDR AGQFTASFDA VLADAGITAV TIPPRAPRAN AYAERFVHTV RTEVTDRMLI
FSERHLRTVL AEYAAHYNGR RPHRGRDLQP PRPDHPVADL SQERIRRQPV LGGLINEYER
AA