| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4619 |
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| Symbol | |
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| ID | 5672964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 5508728 |
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| End bp | 5509957 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641243480 |
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| Product | putative PAS/PAC sensor protein |
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| Protein accession | YP_001508896 |
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| Protein GI | 158316388 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGAGAGC CGAGGATCGA CTACGAGGCC GTTTTTCGGG CTCTCCCCAG CCCGACCTTG
CTACTGACCC CTGAATTGAT CATACTTGCC GCCAACGAGA CATATCTTCA GGTGTCGGGG
CGCACACGCG AGAACCTGCT GGGACGCTAC CTGTTCGACG CTTTCCCGGA CAATCCGGAG
TACCGGTCCG CGTCAGCGGT GCGCGCACTT GGCGCGTCGC TACGGCGAGT GCTGGCCACC
GGGGAGCGCG ACACCATGGC GGTCCAGCGT TACGACGTGG AGGCACCAGC GCGTCCAGAT
GTGTTCGAGG AGCGGTACTG GAGCACGGTC AACACTCCGG TGCTTGATCC TGACGGGCAG
GTGACGTTGG TGGTGCACCG GGTGGAGGAG GCGACCGACC TCGTCCGCAT GTGCGCCGGA
GAAATGGGGG ACGACCGGCA GCACAGGCTG GAGGTGGAGC TGATGGCCCG TGCTCGGGAG
CTGCACGAAG GCAACGAGCA GCTGCGTCGA ACTCACGCTC GGGAACGCGA GGTGGCCCTG
GCACTCCAGG AAGCGATGCT GCCCACGCCC GCACCGACCG GGCACGTCAA GGCGGCAGTG
CGGTACCAGC CCGCCGCCAG CACGATGAAC GTGTGCGGTG ACTGGTACGA CCTGGTGGAG
CTATCCGAGG ACCGCGTCGC GGTGGCCGTG GGCGACGTCG TCGGCCACGG ACTGTCGGCC
ACGGGCACGA TGGGCCAACT GCGCAGCGCA CTGAGCGCCA TGGTCCGAGT GGCCGACGGA
CCCGCAGCCG CCCTGGACGT GCTGGACCTG TACGCACGGT CGGTAGAAGG CGCCGAGTCG
ACCACCGTCG TGCAGGCGGT CGCCGACTAC GACACGCTCA CCGTCACCTA CAGCCGGGCA
GGTCATCCGC CGCCGGCACT GGCGCACGTC GGCGGCGCCA TCGAGTTCCT CGACCAGACC
GTCGACCCGC CGCTGGGCGC GAGCCCGGAA CACCTGCCCC GGTCCCAGGC CACCGCGACG
TTCGCGGTCG GCGCCACGCT GACGCTGTAT ACCGACGGCC TGATCGAACG CCGCGGGGAG
AACATCGACG TCGGGTTGTC CCGTCTTGCC GCCAGCCTCC GCCGCAACCC GGGACTTGAT
CCGGAGGCAC TGGCCGATGC GCTGCTGGCC GAGGTGGGCG CGGACAGCGA GCCAGCCGAC
GACACCGCCG TCGTCGTCGT CCGACTCTGA
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| Protein sequence | MGEPRIDYEA VFRALPSPTL LLTPELIILA ANETYLQVSG RTRENLLGRY LFDAFPDNPE
YRSASAVRAL GASLRRVLAT GERDTMAVQR YDVEAPARPD VFEERYWSTV NTPVLDPDGQ
VTLVVHRVEE ATDLVRMCAG EMGDDRQHRL EVELMARARE LHEGNEQLRR THAREREVAL
ALQEAMLPTP APTGHVKAAV RYQPAASTMN VCGDWYDLVE LSEDRVAVAV GDVVGHGLSA
TGTMGQLRSA LSAMVRVADG PAAALDVLDL YARSVEGAES TTVVQAVADY DTLTVTYSRA
GHPPPALAHV GGAIEFLDQT VDPPLGASPE HLPRSQATAT FAVGATLTLY TDGLIERRGE
NIDVGLSRLA ASLRRNPGLD PEALADALLA EVGADSEPAD DTAVVVVRL
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