Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_4615 |
Symbol | |
ID | 5672960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 5500779 |
End bp | 5501666 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641243476 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001508892 |
Protein GI | 158316384 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0395] ABC-type sugar transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.60944 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACCG TCACCTCTGC TCCCGCAGCC GGCCCCGCCA CGGCGCCTGC CCGGCGCCCG ACGCGGGACC GCACCGCGCT GCTCGGCTGG TCAGCCGCGA ACCTCGTCAT CGTCGGGATG TCGCTGGTGC CGTTGCTGTG GCTGGTGTCG CTGTCGTTCA AGACCCCGGC CAGCATCACC GACGGCAGCT TCATCCCGCG CGAGTGGACC TTCGAGAACT ACCGGGAGAT CTTCGGTGAG TCCCTGTTCA CCCGGGCACT GCTGAACAGC CTCGGGATCG CGCTCATCTC CACCGCGCTC GCGGTGGTTC TCGGCTCGAT GGCCGCCTAC GCGATAGCCC GGCTCGCCTT CCCCGGCAAG CGGCTGCTCG TCGGCCTGGC CCTGCTGATC GCCATGTTCC CGCAGATCTC CCTGGTCAGC CCGCTGTTCA ACCTGTGGCG CCAGATCGGC ATCTTCGACA CCTGGCTCGG GCTGATCATC CCGTACCTGA CGTTCTCCCT GCCGCTGGCC ATCTACACGT TGTCGGCGTT CTTTCGGGAG ATCCCCTGGG ACCTGGAGAA GGCCGCACAG GTCGACGGAG CCACCCCGCG GCAGGCGTTC CTGCGGGTCA TCGCCCCGCT GGCCGCGCCG GGCATGGTGA CCACCGCGAT CCTGGTGTTC ATCTTCTGCT GGAACGACTT CCTGTTCGCC ATCTCGCTGA CGTCGACGGA GCAGTCGCGG ACCGTCCCGG CCGCCATCGC GTTCTTCACC GGCGCGTCGC AGTTCGCCCA GCCGATCGGG TCGATCGCGG CGGCGGCCGT CGTCATCACC ATCCCGATCA TCATCTTCGT GCTGCTGTTC CAACGTCGGA TCGTCGCCGG GCTGACCTCC GGCGCGGTGA AGGGATAG
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Protein sequence | MTTVTSAPAA GPATAPARRP TRDRTALLGW SAANLVIVGM SLVPLLWLVS LSFKTPASIT DGSFIPREWT FENYREIFGE SLFTRALLNS LGIALISTAL AVVLGSMAAY AIARLAFPGK RLLVGLALLI AMFPQISLVS PLFNLWRQIG IFDTWLGLII PYLTFSLPLA IYTLSAFFRE IPWDLEKAAQ VDGATPRQAF LRVIAPLAAP GMVTTAILVF IFCWNDFLFA ISLTSTEQSR TVPAAIAFFT GASQFAQPIG SIAAAAVVIT IPIIIFVLLF QRRIVAGLTS GAVKG
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