Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_4544 |
Symbol | |
ID | 5672893 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 5421088 |
End bp | 5421864 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641243409 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001508825 |
Protein GI | 158316317 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTGAGGC AGACGGATAT CAGAATGAGC ATCTCAGGCA TCCACGCGCT CATGGCCGCG CCCTACGGTT CATCCATGAA CCTCTCTGGA AGCATCGCCC TCGTCACCGG CGCGAACCGC GGCATCGGCC GCCACTTCGT CGAACAGCTC CACGACCGGG GGGCGTCGAA GGTCTACGCC ACGGCGCGCA ACCCCCGGTC GGCCGACCTC CCCGGTGTCG AGACGCTGCC GCTCGACATC ACCGACCCGG ACTCGGTCGC CGCGGCCGCC GCCGCGGCAT CCGACGTCAC GCTGCTGGTC AACAACGCCG GCGTGTCCAC CGCGCAGAAT CTCGTCACCG GCGATCTGAC GAAGATCCGT CTTGAGATGG ACACCCACTT CTACGGAACC CTCGCGATGG TGCGCGCGTT CGCCCCGGTG CTCGCCGGCA ACGGCGGCGG CGCGGTCCTC AACGTCCTTT CCAGGCTGTC CTGGCTGTCC TATCTCGGGG CCAACGCCTA CAGCGCGGCC AAGGCCGCGG AGTGGAGCCT GACCAACGGA ATCCGCCTGG AGCTGCGCGA GCAGGGCACC CTCGTCACGG GTCTGGTCCT GAGCAGCACA GACACCGACA TGATGGCCGG CTGGGACATC CCGAAGAACG ATCCGGCCGA TGTCGTACGT GCGGCGTTGG ACGGCCTGGA GGCCGGGCGG TTCGAGATCC TCGCCGACCG GGACAGTGCC GAGGCCAAGG CGGCGCTCAG CACCGACCCG GGTGTCCTGT ACGCCCAGAC CGGATGA
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Protein sequence | MVRQTDIRMS ISGIHALMAA PYGSSMNLSG SIALVTGANR GIGRHFVEQL HDRGASKVYA TARNPRSADL PGVETLPLDI TDPDSVAAAA AAASDVTLLV NNAGVSTAQN LVTGDLTKIR LEMDTHFYGT LAMVRAFAPV LAGNGGGAVL NVLSRLSWLS YLGANAYSAA KAAEWSLTNG IRLELREQGT LVTGLVLSST DTDMMAGWDI PKNDPADVVR AALDGLEAGR FEILADRDSA EAKAALSTDP GVLYAQTG
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