| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4534 |
|---|
| Symbol | |
|---|
| ID | 5672883 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 5410246 |
|---|
| End bp | 5411211 |
|---|
| Gene Length | 966 bp |
|---|
| Protein Length | 321 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641243399 |
|---|
| Product | Citryl-CoA lyase |
|---|
| Protein accession | YP_001508815 |
|---|
| Protein GI | 158316307 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2301] Citrate lyase beta subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.668521 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGTCTGCTC ATGCTCGGTC CGCTCGTGCT CGCCGGTCGT GTCTGGCTGT TCCGGCTTCG
AACGTGAAGA TGTTGGGGAA GGCGCAGGGT CTTCCTGCCG ACCAGATCTT CTGTGATCTG
GAGGACTCGG TTGCCCCGGG GGCGAAGGAG TCGGCGCGGG GGAACGTCGT GTCGGTGTTG
AACGAGGGTG ACTGGGCGGG TAAGACCCGG GTTGTGCGGG TCAATGACCT GACGACGAAG
TGGACCTATC GTGATGTCGT GACGGTGGTC GAGGGTGCGG GGGCGAACCT GGACTGTGTG
ATGCTGCCGA AGGTGCAGAC CGCCGCGCAG GTGCAGTGGC TGGATCTGTT GCTGACGCAG
ATCGAGGAGG TGATGGGTTT CGAGGTCGGG CGGATCGGTA TCGAGGCGCA GATCGAGAAC
GCGCTGGGTC TGTCGAACGT GAAGGAGATC GCGTTCGCCA GCCCGCGGAT CGAGACGATC
ATCTTTGGTC CGGCGGATTT CATGGCGTCG ATGAACATGC CGTCGCTGGT GGTGGGTGCG
CTGAACCCGG ATTATCCGGG GGACCCGTTC CACTATGTGC TGTTCAAGAT TTTGGAGGCG
GCGCGGGCGC GGGGGGTGCA GGCGATCGAC GGGCCGTTCC TGCAGATCCG GGATGTGGAG
GCGTTCCGTG GGGTGGCGAA GAAGTCCGCG GCGTTGGGTT ATGACGGTAA GTGGGTGCTG
CATCCGGGGC AGATCGATGC CGCGAACGAG GTGTACGCCC CCCGGCAGGA GGATTACGAC
CACGCTGAGC TGATCCTGGA CGCCTATGCC TGGCACACCT CGGACGAGGG TGGGCTGCGG
GGCGCGGTGA TGCTCGGGGA CGAGATGATC GACGAGGCGA GCCGGAAGAT GGCCGAGGTG
ATCGCGGGCA AGGGGCGTGC CGCGGGTATG GCGCGTACCG CGGCCTTCGA GCCGCCGGCC
GGCTGA
|
|---|
| Protein sequence | MSAHARSARA RRSCLAVPAS NVKMLGKAQG LPADQIFCDL EDSVAPGAKE SARGNVVSVL
NEGDWAGKTR VVRVNDLTTK WTYRDVVTVV EGAGANLDCV MLPKVQTAAQ VQWLDLLLTQ
IEEVMGFEVG RIGIEAQIEN ALGLSNVKEI AFASPRIETI IFGPADFMAS MNMPSLVVGA
LNPDYPGDPF HYVLFKILEA ARARGVQAID GPFLQIRDVE AFRGVAKKSA ALGYDGKWVL
HPGQIDAANE VYAPRQEDYD HAELILDAYA WHTSDEGGLR GAVMLGDEMI DEASRKMAEV
IAGKGRAAGM ARTAAFEPPA G
|
|---|
| |