Gene Franean1_4463 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4463 
Symbol 
ID5672814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5330856 
End bp5331422 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content70% 
IMG OID641243331 
Producttransposase IS4 family protein 
Protein accessionYP_001508747 
Protein GI158316239 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGACC CCGGGCGGGA GCAACGGCGA CGCCTCCGGC GCCGACGCAA GGTCCGGCTG 
ACCGCTGCTC TGCTCGGACG GTCGCGGGGC GGGCAGACCA GCAAGGTCCA TCTTGCCGCT
GACCGGCGGT GCCGGCCGTT GGCGTTCGTG CTGACCGTCG GGCAGGCCGC GGACAGCCCG
CAGTTCATAC CCGTGCTGGA GAAGGTACGA GTGCCCGGGC CGGTCGGTCG TCCCCGCACC
CGACCCGGGG CGGTCGCCGG AGACAAGGCG TACTCGTCGC GCGGCAACCG TGCCTACCTG
CGCGGACGTG GCATCAAGGC CGTCATTCCC GAGAAGGCCG ACCAGGCCGC CAACCGCATG
AGGAAGGGCA GCAGGGGCGG GCGCCCCGTC CGCCACGACG CTGATCTCTA CAAGGAACGG
AACACCGTCG AACGTCTGAT CAACAAGTTG AAGGCCTGGC GGGGCATCGC CACCCGCTAC
GACAAGACCC CGGGCAGCTA CCTTGCCGGC CTTCACCTCC GCGCCTCGAT GATCTGGATC
AAGGAGTTCA CCCGGACCCC CCTTTGA
 
Protein sequence
MDDPGREQRR RLRRRRKVRL TAALLGRSRG GQTSKVHLAA DRRCRPLAFV LTVGQAADSP 
QFIPVLEKVR VPGPVGRPRT RPGAVAGDKA YSSRGNRAYL RGRGIKAVIP EKADQAANRM
RKGSRGGRPV RHDADLYKER NTVERLINKL KAWRGIATRY DKTPGSYLAG LHLRASMIWI
KEFTRTPL