Gene Franean1_4425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4425 
Symbol 
ID5672777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5286626 
End bp5287708 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content65% 
IMG OID641243294 
Producthypothetical protein 
Protein accessionYP_001508710 
Protein GI158316202 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCCCGG CGAACACCGA CGTGTGCCCA ACGATCCGGC CCGGCCAGGT CTGGCTCGAC 
ACCGCGGGCC GGCGCATCCA GGCCCACGGG GGCTCGATCA TCACGGGCAC CGACGGCCTG
TTCTACTGGT ACGGCGAGAA CAAGGAGAGG ACGATACCGG GCAGCGGCAA CTGGCACTGG
GGCGTGCGGG CGTACTCGTC GTCCGACCTG GTCACCTGGA CCGACCGGGG CCTCATCATC
CCGCCGGTAG CCGGCGATCC CACTTCGCCG TTGCATCCAA CGCAAATGAT GGATAGGCCA
CACATCCTGT TCAACGAGCG CACGGGGAAG TACGTGTGCT GGCTTAAGAT CATGGGCAGG
GACGGCCAGC AGACCCAAAC CTCCACCGTC CTCGTCGCCG ACGATCTGCT GGGACCCTAC
GAAATCGTAC GCACCGGGTT GCGGCCGTGT GGCTTCGACG CCGGCGACTT CGATCTAACC
GTCGACCCGA AGACGGGCAA CGCCTACTAC TACTTCGAGA AGGTGCACAC CGAGCTCATC
TGTGTCGAGC TCACGGACGA CTACACCGAC GTCACGGGGA ACTACAGCAG CCACTTCCCG
CACCCAGGAC CGCCCTTCAC CCGCGAGGCA CCCGCGCACT TCGAGCGCGG CGGATTCCAC
TACCTCATCA CCTCGGGCAC GACCGGTTAC TTCCCCAACT TCTCCGAGGT CGCGGTCGGC
CTGAGCTATC ACGGCCCGTT CGACGTCCTC GGTGACCCAC ATCCCCATGA CGCCTCGCGA
ACCTCGTACC GGTCGCAGAT CAGCTCCGTG TTCAAGCACC CCCACAAGAA CGACCTCTAC
ATCGCCCTCG CTGACCGATG GCTCCCGCAA CTGCCGGAGG ACATGCCCAA CGTCTACGAC
GTTGTCGCGG CGATGGCGCG CGGCGAGACG CCACCCTCAA CCGGCAACGA TCAGACGGTG
ATGGCGGCGG TGCGCGGCGA GAACACAGCG ATCGCCGACT ACGTGTGGCT ACCGATCCGC
TTCGACGACG ACCGCCCATC CATCGTTTGG CTCGACGAAT GGAGCCCCCA CGACTTCGTC
TGA
 
Protein sequence
MTPANTDVCP TIRPGQVWLD TAGRRIQAHG GSIITGTDGL FYWYGENKER TIPGSGNWHW 
GVRAYSSSDL VTWTDRGLII PPVAGDPTSP LHPTQMMDRP HILFNERTGK YVCWLKIMGR
DGQQTQTSTV LVADDLLGPY EIVRTGLRPC GFDAGDFDLT VDPKTGNAYY YFEKVHTELI
CVELTDDYTD VTGNYSSHFP HPGPPFTREA PAHFERGGFH YLITSGTTGY FPNFSEVAVG
LSYHGPFDVL GDPHPHDASR TSYRSQISSV FKHPHKNDLY IALADRWLPQ LPEDMPNVYD
VVAAMARGET PPSTGNDQTV MAAVRGENTA IADYVWLPIR FDDDRPSIVW LDEWSPHDFV