| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4419 |
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| Symbol | |
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| ID | 5672771 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 5278279 |
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| End bp | 5281791 |
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| Gene Length | 3513 bp |
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| Protein Length | 1170 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641243287 |
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| Product | YVTN beta-propeller repeat-containing protein |
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| Protein accession | YP_001508704 |
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| Protein GI | 158316196 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3391] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02276] 40-residue YVTN family beta-propeller repeat |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.834695 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGGAGTTT GGGTTGGCTC ACGAATACGC AGTCAGAGGG GGCTGATCGT CATACGCAAT
CGTCGTGTCT TCGCGTGGTC TGTTTCGGTG CTAGGCGTTG TGCTGAGTAT CGGGCTGACC
AGTTCCGTGG CAGCGGTGTC CTCGTCGAGC GCCTCTTCGA AAAAAGCCTG TGGGAGCTCA
GGCGTCCTCG ACAAGAAGAC ATGCACCTAC AGCACGGTCG GGTCAGACAC CTTCACCGTG
CCCAACGGCG CAAAATGGGT CGAGATAACG GTGGTCGGCG CCCAGGGCGG GCATTACTTT
ATTGCCGGTG ACGACTTTCA TGGCGGCTCG CCGGTGGGTG ATATCACCGG CCGTCCGGGT
GGGGGCGGCG GCCAGGCGTA CGGCGTGATA GCGGATCTGT CCTCAGGTCA GGTTCTGCAG
GTCGATGTTG CCGGTAAGGG TACTGACGGC ACGGCGGCGA GCCGGTCTGG CGGGAAGAAC
AACGGACCCT CCGGGGGACA GGGCGCCGTG GGGGGCTTCG GTGGCTCCAA CGGCGGTGTA
GCAGGCGGTA AGGGGGACGC CGCCGGGGCT GATGGCGGGA CCGCGATCCT CAACGGTGGC
AACGGCGCCG GTGGCGGCGG CTCCTCGGAT GTACGGATCG CGACTGGTGG CTGCGCGACG
TTGACGTGCG GACTGACGGA CCGAGCGCTG GTCGGTGCGG GCGGCGGCGG AGGCGGCGGC
ACTGGTGGCC AGGGCTACGC GCTGGGCGGT GCCGGCGGCG CCGGTGGCGG TGCTGCCGGC
GCGGCTGGTG GTGCCGTCGT CGATGGTGGC CACCCGGGGA CTCCTGGGGG CGGTGGAACC
CAGACCGCAG CTGGGGTCGG GGGGCTCAAC GCCGGGCGGC ACGCGACTCC GCCTCCGCCC
GATCCCAACG ATCCGCGTTT CGGCGGTGAT GGCACCGATG GCCGCTCTGG GTCAGGCGGC
GCCGGGGGCG TGGGAAACCA GGCCTGCCTG GGTCTGCACA CCCCGCCCTG CCGGAACCCC
GATGATCCGG CCGCGGGCGG TGGCGCCGGT GGCGGCGGTG GTGGTGGGTA CTTCGGTGGT
GGCGGCGGCT CGGGAGGTGG TGGCCTCTCG ATCGGTGGCG GCGGGGCAGG TGCCGGCGGG
GGCGGGGGAA GCTCCTTCGC CGCCCCCACC GTGAGCTCTG TCGTCCTGAC CGCTGGTGTC
AACGCCGGGA CCGTCAATAA CGGCAACGGC CAGGTCACCA TCACGTGGGG TAGCTCTAAC
GAACCTAAGC CCACTCACCC GTCTGAGCCA GAACCGACAC CGAGCCCGGA ACCAACACCG
AGTCCAGAAC CGACACCGAG TCCAGAACCA ACGCAGGAGC CTGGTCCGAA GCCGGCAGCG
GCCACCGCCT ACGTGATCAA CAATTTCGGG AACACGGTCA CCCCGATCGA CGTGACGACC
AATACGGCCG GTGCCCCGAT CCGGGTCGGT GCAAGCCCCA GAGGGCTTGC GGTCACGCCT
GATGGCAGGA CCGTCTATGT GACGAACCGG GCCGACAACA CGGTGACGCC GATCGATGTG
GCCACCAACA CCCCTGGAGC CCCGATCCCG GTCGGTCAGT TCCCGTTCGG GGTCGCAGTG
ACTCCCGACG GCCGGACCGC TTACGTGGTG GACAACCTCA GCGATGACGT GACGCCGATC
GATGTCGCCA CCAATACTCC CGGTGCCCAC ATCCCGGTCG GGGACAATGC ACACTACGTC
GCGATCACCC CTGATGGCAG GACCGCCTAC GTCACCAACG CCGCAAGCAA CACGGTGACG
CCGATCGATG TGGCCACCAA CACCCCCGGC ACCCCGATCC CAGCCGGGAA CAACCCACAG
GGGATTGCGA TCACGCCCGA CGGCAAGACC GTGTACGTCA CGGACAACGC CGACGCTGCC
AGCGCCACCG TGACACCGAT CGATGTGGCC ACCAACACTC CCGGCACACC GATTCCGGTC
AGCGACCGCC CGGTCGGGAT CTCGATCACG CCCGATGGTC GAACCGTGTA CGTCACCAAT
GAGCGTGACA ACGTGGTGAC GCCGATCGAT GTGGCCACCA ACACCCCCGG TACTCCTATC
TCCACCGGAG GCATCGAGCC GTTCTACATC GCGGTCACGC CGGACGGCGT GGCCGCCTAT
GCGGTCAACC GTGACAGCGA CACGGTGACG CCGATCGATG TGGCCAGCAA CACCGCCGGC
ACCCCGATCC CCGTCGGTGA CCGGCCGGTG GGGATCGCGA TCAGCGCACC ACCGAAGGCC
GTACCGCCCC CGCCGGTGTG CGGGATGACC GGTGTGCTGT CCGGGACGAC GACAATGACC
TGCACGTATC ACACCATCGG ATCGGACACC TTCACGGTGC CCGCGGGAGT GGGCTCGGTC
GAGGTCGTGG TGACCGGCGC CCAGGGCGGG CACTACTTCA TCGCTGGTGA TGCGGCACAC
CCGTCCCCGG CAGGGGACAT CACCGGGCGT CCCGGAGGCG GCGGTGGCCA GGCGTCCGGG
GCACTGACGG GGCTGAAGGA CAACCAGGTC CTGCAGGTGG ACGTGGCGGG CAAGGGCGCC
AACGGAACCG GGGCCTCGCG CTCGGGCGGA ATGAGCAATG GCCCGTCCGG CGGATCGGGA
GCACTCGGGG GGTTCGGTGG GTCCGACGCC GGCGTGCCAG GTGGGCCCGG TGATGGCTCC
GGTGCGAACG GCGGAACAGC GTTCAACGGT GGTAACGGCT CCGGCGGCGG CGGTTCCTCC
GACGTCCGCG TGGCCGCGGC GGGATGTGTC GCACGGAAGT GCGACCAGTC CACCCGGGTG
CTGGTCGGTG CCGGCGGAGG CGGCGGCGGC GTCGGCGGGC AGGGCAACGC GCTCGGTGGA
GCCGGGGGTG CCGGCGGCGG TGACGTCGGC ACCGGCGGTG GGTCGACCGT CGATGGTGGT
AATGCCGGAC TCCCGGGCAA GGGCGGCACC CAGACCACCG GAGGCGCCGG AGGGCTGAAC
GCGTGCCGGC ACGGTGCTGG GAATCCCCCG ACCACCGATC CGCTGACCGA TCCGCGCTGC
GGCGGGGACG GTACTGAAGG CACGTCCGGT GCCGGCGGTG CCGGCGGGGC CGGGAACCTG
CCCTGCACCG GGGTGCACAC CCCGCCCTGC CTGGACCCGA CCGCCACCAC GTCCGGTGGT
GGCGCGGGTG GCGGCGCGGG CGGCGGCTAC TTCGGTGGCG GCGGCGGCTC CGGTGGCGGC
GGCACCTTCG GCGGCTACGG TGGCGCCGGC GGCGGGGGCG CGGGCGGGAG CTCGTTCGCC
GCGTCGACCA TCGAGAACCC CGTCCTGACC ACCGGGGTCA ACTCGGGCAC GATCAACGAC
GGCAACGGTG AGGTCACGAT CACCTGGACT CCTCCCGGTA TTTCGACTCC GGCTCCGATC
TTGACCGCCA CGCCGACCCC GACCCCGACC CCGACCTCAA CCCCCATACT GGCCCCCACG
CCCACACTGG CCCCGAAGCC CGACCAGACG TAG
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| Protein sequence | MGVWVGSRIR SQRGLIVIRN RRVFAWSVSV LGVVLSIGLT SSVAAVSSSS ASSKKACGSS
GVLDKKTCTY STVGSDTFTV PNGAKWVEIT VVGAQGGHYF IAGDDFHGGS PVGDITGRPG
GGGGQAYGVI ADLSSGQVLQ VDVAGKGTDG TAASRSGGKN NGPSGGQGAV GGFGGSNGGV
AGGKGDAAGA DGGTAILNGG NGAGGGGSSD VRIATGGCAT LTCGLTDRAL VGAGGGGGGG
TGGQGYALGG AGGAGGGAAG AAGGAVVDGG HPGTPGGGGT QTAAGVGGLN AGRHATPPPP
DPNDPRFGGD GTDGRSGSGG AGGVGNQACL GLHTPPCRNP DDPAAGGGAG GGGGGGYFGG
GGGSGGGGLS IGGGGAGAGG GGGSSFAAPT VSSVVLTAGV NAGTVNNGNG QVTITWGSSN
EPKPTHPSEP EPTPSPEPTP SPEPTPSPEP TQEPGPKPAA ATAYVINNFG NTVTPIDVTT
NTAGAPIRVG ASPRGLAVTP DGRTVYVTNR ADNTVTPIDV ATNTPGAPIP VGQFPFGVAV
TPDGRTAYVV DNLSDDVTPI DVATNTPGAH IPVGDNAHYV AITPDGRTAY VTNAASNTVT
PIDVATNTPG TPIPAGNNPQ GIAITPDGKT VYVTDNADAA SATVTPIDVA TNTPGTPIPV
SDRPVGISIT PDGRTVYVTN ERDNVVTPID VATNTPGTPI STGGIEPFYI AVTPDGVAAY
AVNRDSDTVT PIDVASNTAG TPIPVGDRPV GIAISAPPKA VPPPPVCGMT GVLSGTTTMT
CTYHTIGSDT FTVPAGVGSV EVVVTGAQGG HYFIAGDAAH PSPAGDITGR PGGGGGQASG
ALTGLKDNQV LQVDVAGKGA NGTGASRSGG MSNGPSGGSG ALGGFGGSDA GVPGGPGDGS
GANGGTAFNG GNGSGGGGSS DVRVAAAGCV ARKCDQSTRV LVGAGGGGGG VGGQGNALGG
AGGAGGGDVG TGGGSTVDGG NAGLPGKGGT QTTGGAGGLN ACRHGAGNPP TTDPLTDPRC
GGDGTEGTSG AGGAGGAGNL PCTGVHTPPC LDPTATTSGG GAGGGAGGGY FGGGGGSGGG
GTFGGYGGAG GGGAGGSSFA ASTIENPVLT TGVNSGTIND GNGEVTITWT PPGISTPAPI
LTATPTPTPT PTSTPILAPT PTLAPKPDQT
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