Gene Franean1_4381 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4381 
Symbol 
ID5672734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5227231 
End bp5227563 
Gene Length333 bp 
Protein Length110 aa 
Translation table11 
GC content68% 
IMG OID641243250 
ProductArsR family transcriptional regulator 
Protein accessionYP_001508667 
Protein GI158316159 
COG category[K] Transcription 
COG ID[COG0640] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.606402 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACGC CGCTGTACCA GCTGAAGGCG GAGTTCTTCC GGACCCTTGG CCACCCGGCG 
CGTATCCGGG CGTTGGAGCT GCTCAGCGAA CGAGAGTGGT CGGTGAGCGA GCTGGTGCCC
GAGATCGGGT TGGAGGCGTC GCATCTGTCC CAGCAGCTCG GGGTGCTGCG CCGCGCCGGG
CTGGTGACAA CCCGTAAGCA GGGTACGACC GTGTTCTACG CGGTGGCGTC GCCGGAGATC
GTGACGTTGC TGGCGGTGGC CCGCTCAATC CTGACCGGCG TGCTACACGA GCAGGCCGAC
CTGCTGCGTG ACCTACTCGC CACCGAGCCC TGA
 
Protein sequence
MATPLYQLKA EFFRTLGHPA RIRALELLSE REWSVSELVP EIGLEASHLS QQLGVLRRAG 
LVTTRKQGTT VFYAVASPEI VTLLAVARSI LTGVLHEQAD LLRDLLATEP