Gene Franean1_4342 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4342 
Symbol 
ID5672697 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5185616 
End bp5186164 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content75% 
IMG OID641243215 
ProductFHA domain-containing protein 
Protein accessionYP_001508632 
Protein GI158316124 
COG category[T] Signal transduction mechanisms 
COG ID[COG1716] FOG: FHA domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.112903 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCCGG TACCGCTGCG TGTCCAGACG CCCTCCGCCC AGGCGACGTC CGCCCAGGTG 
ATACTGCCCG GCGAACGACT GGCCGTCGTC GGGCGTGGGC GGGACGCGGA CGTCGTCGTC
GCCGACAGCC GGGTGTCGCG GCGACACGTC GAGCTCGAAC CCAGCGGGGA CGGGTGGACG
GTGCGTGACC TCAGCGCCAA CGGCATATGG TGCGACGGGC GGCGGACCGC GACCGTGCGC
ATCCAGTTCG ATGAGGTCCG ATTGCGGCTC GGCGCGGCCG ACGGCCCGGA ACTGGTGCTC
GTCCCGCAAC GGGCGGCCGG ACCACCAGCC CAGCCCGGAC CGGGTCTCGA CGTCGGCGAC
ATGGCGACCC GGTTGGCCGT CGGCGGCCCG CTGGCACCCG CGCGGCCACG CCCGGTGGGA
CCCGGACCCG CCGCCGTCCC GGCCCCGGTC AAGACGGCAG CGCCACCGCG CTGGGCTCGC
GCGTTCCCCA CCCTGGCGTG GCTGGCGGCA GCCGCCTTCG CCGTCGGCGC ACTGATCGCG
CTTACCTGA
 
Protein sequence
MSPVPLRVQT PSAQATSAQV ILPGERLAVV GRGRDADVVV ADSRVSRRHV ELEPSGDGWT 
VRDLSANGIW CDGRRTATVR IQFDEVRLRL GAADGPELVL VPQRAAGPPA QPGPGLDVGD
MATRLAVGGP LAPARPRPVG PGPAAVPAPV KTAAPPRWAR AFPTLAWLAA AAFAVGALIA
LT