| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4246 |
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| Symbol | |
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| ID | 5672601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 5056197 |
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| End bp | 5059073 |
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| Gene Length | 2877 bp |
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| Protein Length | 958 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641243119 |
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| Product | WD-40 repeat-containing protein |
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| Protein accession | YP_001508536 |
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| Protein GI | 158316028 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2319] FOG: WD40 repeat |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.713375 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGTTT CATCGAACTG GGGGCGAGCC GGCTCCGCAC ATCACTACGA TGCTTTCATC
TCCTACACCG AGGCAGACGT CGCGATCGCC CGGGAACTAG AACGCGCAAT CGCCTCGCAT
GTTTCTCCGG ACCCCCGACT GAAGAGCCCG AGAGTCTTCC GGGACCGTAC CAAACTAACT
ACCGCTCCAC GGCTCGCCGC GGCCATCGAG CAGGCTCTCG ATCGCTCGGA ATACTTCGTG
CTGGTGGCCT CACCGGACGT CGTCCATTCC AGGTGGGTAC GGCTGGAGAT CGAGGCGTGG
CAGCGGAGGG ACTACCGGTT CGAGCGACTC CTTGTCGTCC TGGCCGGGGA GGATCTTCGC
ACGTCGCTCC CCGGCCCACT CCGTGCGTTC TACTTTCCCG AGCGCGTCGA CAGCACCGGG
GACGCCCGAC ACACACCCCT GGAGCTCTCC CCCAACTACC TGTCCGTCAA GCCAGTGATC
CGCTCACTGC ACAAAAAGCA CGGCAGACGC CCCAGCCGCC CGGGCCGACT GTCCCAGAAC
GCGACCGAAG AAGAGATAGG AGAGTTCGAG AGCCAGAGAC AGAAATGCGA GGAATGGGAC
CAGAATGCCT CGTCCCTAAT CACCAGCCAT GACGAATTCG CCGCGAGCGC GGGCGAGATC
ACGGCACGCC TTTATAATGT CGACAAGGAT GAGCTCGACC AGGCAAAGAT ACGCGAGGAG
AGGAAGAAGA AGCGGAAGCG GCGCTGGCTG AGAGTCATTT CGGCGACGGC CACGGCAGGT
ATTCTGAGCC TCGTCGTGAT CCTCTTGGCG CTACGGCAGG AGGCGGGCCG GCAGCGTTCG
GACGCGGACC AGAAGCGTGC GGTAGCACGC TCCGAGCAGC TTGCCCAGAC TGCCCGCGCC
CTGCTTGAGA CCTCGCCGAA CACGGCGAGA CAGATCAGCC TGGCCGCCTA CGACGTCGCT
CCGACAGCCA CCGCGCGGAG CGCCATGATG GCGGCCGGCC GGGAGCCGGG AACAATCGAT
GCCCGGTCGG TGGGGGGACT GCGCCTCAGT CCAGACGGTC GCCTCCTCGC GATCGTCGAG
ACCGCCACGA CCGACAACGT CGTCAGGCTC TGGAATCTTG CCACCCATCG TGTCGCCGCG
ACGGTCACCG GCCACCGGGG CAAGGTGAAC GCGGTCGCCT TCAGCCCCGA CGGCCGGCTT
TTCGCGACTG CGGGCGACGA TCATACGGCC CGGATCTGGT CGGTTGCCGA CGCCGTCGCC
GCGCGTGAGG TCAACGTTCT CCGGCCGGGC CTCGGGCCGC TCACGGCGCT GGATTTCGGA
GCCGCGAACC AGTTGGTGCT TGGTAGCGCC CAGATTCGCT CGGTCGCCTC CGATCCAACG
AGCCCCGGCA GAGAGATCGA CAGTGCTACG AGTTCGCTGC AGGCCTGGGT TGGCGTCGAG
GGGCGAAACC CCGTTGGGGG GCCTGTGCTG ACAATGGACG GCGGGAATGT GACCTCAGTC
GATGTCGCAC CCGAGGGCGG GCGTCTGGTC GTTCACGCAG GCGCCACCAT GCTGTGGGAC
GTCGGTCCGA CGAGCATGAT CACAGGCGGC CCGCTCACCC TGCCAGGGAC GCGCGACACC
GACATCTACG CCGATGACCG CCAGGATCTC GACGGGGACG GCTTCGCCGA CCGTGTCGCC
TGTTTCACCA CCGGCGGCCG GGTCGTCGTC TCGGGCCCGC AGGTCTTCGA TGTCGGTGCC
GGCACCCTGG TTCGGGCCGC GTCTCCGCTG GGTGCATCAC AGGACAGCCC GCTGGCAGCG
GCCTGTGACA GCGGAGTCGT CAGCGCCGCG CCGGACATCC GGGGTGTCCG TGTCTGGTCA
ACGCCCGCGA ACGACGCAGG TGCGCTGGTC GCCCGGCCGA TACCCGATCT GGGCGAGGCA
CACGGCGCGA CCGCAGTCCT GAGTACGGAG GGCGATCTGC TCGCTTTCGC GGAACCGGGC
GGCGCGGTCC GCCTTATCGA CATCCGTGAC CCGGCCCGGC TTGGCCGGGT CCAGATCGAG
CAGGCCGAGC CACGGAAGCC GGACCCGGGC ATGTCCTACC GATCGGTCAG ATCGGGTGAG
CGCCATTCGA GCCGGAACGG GACGCTGGCG GTGATAATGG ACGACAGTTC CACGACGGTG
AGTTTCGGGG TGTGGGACTA CTCGGACTCG GCGCATCCGC GCCGCACGGG AACGATCAAT
CTCCCGTCCA GGTCATCACC GGTGCCACCA TCGATCAGCG ATGACGGCAG GCGGCTGGCC
ATGTCGAACA CCGTCAACGC GATCGACATC TTCGGGTTGG ACGACCAGGA TGCACTGGTC
CACATCGGCC GATACGAGGC GTTCGGCGCG CAGATCCCGG GGGCCCCGGG CGCACGCTAC
GCGCCTATTC CCGGAACGTT CAGCGCGAAC GGGCGCATCT ACGCCGCACC GGTCACGGAC
GGCCCGCGGT CCATCCAGCT GTGGGAGGTG CACGAGGATC GCCTCACGGC AGTCTCCACC
GTCCCGACGG CCGGAGAGGT ACTAGCGCTC GACGACGAGG GCGACATGCT GGCCGTCGCG
GATACGGACG GCACCGTGCG GCTCTGGGAC CTGCGGGACA TCCAGGCTCC TGCCCTCTAC
GTTGAGTTCA CTGCCCTGCC CGACAGGCCT GTCACCGAGC TACGGTTCAC CGGCGGTGAC
GACGCCGGAA TGCGTGTCGG TGTCACGCAG GACGACACGG TCTCGTGGTG GGCTGTCAGT
CAGGATGCTC TGGTTGACGA TCTGTGCGCC GAGGTCGGTG ACCTGCTGAG CGCCGACGAA
TGGCGCCGAC TCATCGCCGA CGTGCCTGCG CGCCGGCCCT GCGCAGCGCC CGGCTGA
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| Protein sequence | MSVSSNWGRA GSAHHYDAFI SYTEADVAIA RELERAIASH VSPDPRLKSP RVFRDRTKLT
TAPRLAAAIE QALDRSEYFV LVASPDVVHS RWVRLEIEAW QRRDYRFERL LVVLAGEDLR
TSLPGPLRAF YFPERVDSTG DARHTPLELS PNYLSVKPVI RSLHKKHGRR PSRPGRLSQN
ATEEEIGEFE SQRQKCEEWD QNASSLITSH DEFAASAGEI TARLYNVDKD ELDQAKIREE
RKKKRKRRWL RVISATATAG ILSLVVILLA LRQEAGRQRS DADQKRAVAR SEQLAQTARA
LLETSPNTAR QISLAAYDVA PTATARSAMM AAGREPGTID ARSVGGLRLS PDGRLLAIVE
TATTDNVVRL WNLATHRVAA TVTGHRGKVN AVAFSPDGRL FATAGDDHTA RIWSVADAVA
AREVNVLRPG LGPLTALDFG AANQLVLGSA QIRSVASDPT SPGREIDSAT SSLQAWVGVE
GRNPVGGPVL TMDGGNVTSV DVAPEGGRLV VHAGATMLWD VGPTSMITGG PLTLPGTRDT
DIYADDRQDL DGDGFADRVA CFTTGGRVVV SGPQVFDVGA GTLVRAASPL GASQDSPLAA
ACDSGVVSAA PDIRGVRVWS TPANDAGALV ARPIPDLGEA HGATAVLSTE GDLLAFAEPG
GAVRLIDIRD PARLGRVQIE QAEPRKPDPG MSYRSVRSGE RHSSRNGTLA VIMDDSSTTV
SFGVWDYSDS AHPRRTGTIN LPSRSSPVPP SISDDGRRLA MSNTVNAIDI FGLDDQDALV
HIGRYEAFGA QIPGAPGARY APIPGTFSAN GRIYAAPVTD GPRSIQLWEV HEDRLTAVST
VPTAGEVLAL DDEGDMLAVA DTDGTVRLWD LRDIQAPALY VEFTALPDRP VTELRFTGGD
DAGMRVGVTQ DDTVSWWAVS QDALVDDLCA EVGDLLSADE WRRLIADVPA RRPCAAPG
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