| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4207 |
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| Symbol | |
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| ID | 5672562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 5010092 |
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| End bp | 5010703 |
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| Gene Length | 612 bp |
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| Protein Length | 203 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641243080 |
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| Product | RNA polymerase sigma factor SigK |
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| Protein accession | YP_001508497 |
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| Protein GI | 158315989 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.615524 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGCCG ACCAGATCCA GGCGGCGGCG CTGCGCGCCC TGCCCGGTAC CGGGGACGGC
GTTTGCGGGC CGACCCCGGA GACGCTACTG GCCCGCACGG GCCGCGGGGA CACCGACGCG
TTCGGTGCCC TCTACGACCA GCTCGCCGCA CGCGTGTACG GACTCGTGCG CCGGGTCGTA
CGCGACCCGG CGCAGGCCGA GGAGGTCACC CAGGAGGTCT TCGTGGGGGT GTGGCAGGAG
GCGCCGCGGT TCGACCCCGC CCGCGGCAGC GTCACCGGGT GGGTCTCGAC GATGGCGCAC
CGCCGCGCGG TCGACCGGGT CCGCTCCGTC GAGGCCCAGC GGGCGCGGGA CGTCCGGGTC
GCGGCCCGGT CCACCGCACG GCCGCACGAC CAGGTCGCCG AGCAGGTCGA GACCAGGCTG
GAGCACGAGC GGATCCGCGG CTGCCTGGGC GACCTGACGG CCACCCAGCG CGAGTCGATC
ACACTCGCCT ACTACTCCGG CTACACCTAC CGCGAAGTCG CCGAACTGCT CGAACTACCC
GTCGGCACGG TCAAGACCCG GATGCGTGAC GGGCTGAGCC GGCTGTCGGA CTGCATGGGG
GGCCGGTCAT GA
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| Protein sequence | MEADQIQAAA LRALPGTGDG VCGPTPETLL ARTGRGDTDA FGALYDQLAA RVYGLVRRVV
RDPAQAEEVT QEVFVGVWQE APRFDPARGS VTGWVSTMAH RRAVDRVRSV EAQRARDVRV
AARSTARPHD QVAEQVETRL EHERIRGCLG DLTATQRESI TLAYYSGYTY REVAELLELP
VGTVKTRMRD GLSRLSDCMG GRS
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