Gene Franean1_4206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4206 
Symbol 
ID5672561 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp5009237 
End bp5009920 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content70% 
IMG OID641243079 
Producthypothetical protein 
Protein accessionYP_001508496 
Protein GI158315988 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.600713 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGAAG ACAGCACGGC TGGTACGACT CCGCTGCACC TGCGCGGCCG CGACGCGGTC 
ATCGCCGCCT CCACCGACGC ACGGTGGCGT GACGGGGCCC CGCCGGACTA CCGCTTCTCC
CGCGAGGTGA TGCCCGGGGA GCGCACCGTC CACCACACGC CCGGCTCCCT CGCCGACGTC
GTCGAGCAGC TCGTGCAGGT GTTCGAGATG GAGCTGTCCT ACAAGAGCGA TCCCACCCAG
TGGGTCAGCA TGGTCAGCGA CCGGATCCGG GTCAGCATGA ACGGAGGACC GGCGGCGGAC
AGCGCCGAGC TCACCGAGCG GGGCAGCTAC AACGTCCTGA TCGGCGAGAA CCCCTACTAC
TCGGCCACCG CGGAGACCTT CGAGTCCTCC CATGAGACCT TCCACCGGGC GTTCCCGGGC
GGGTTCTTCT GGGAGGTCCT CGAGGTGTAC TCACCGCCGC CCGTGATCGC CTTCAAGTGG
CGGCACTGGG GCACCTTCGC CGGTCCGTAC CAGGGGCACC AGCCGACCGG CGAGCGGATG
GAGCTGTTCG GCGTCACGGT CGCCCGCTGC GCGCCGGACC TGCGTCTGCT GGCGGTGGAG
AACTTCTACG ACAACACCAC GTTCCTGGGA CGTCTCGCCG GTGCCGACGA GCCGGGGACG
GCCGGTCACC CAGGGCGCGC CTAG
 
Protein sequence
MSEDSTAGTT PLHLRGRDAV IAASTDARWR DGAPPDYRFS REVMPGERTV HHTPGSLADV 
VEQLVQVFEM ELSYKSDPTQ WVSMVSDRIR VSMNGGPAAD SAELTERGSY NVLIGENPYY
SATAETFESS HETFHRAFPG GFFWEVLEVY SPPPVIAFKW RHWGTFAGPY QGHQPTGERM
ELFGVTVARC APDLRLLAVE NFYDNTTFLG RLAGADEPGT AGHPGRA