Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_4206 |
Symbol | |
ID | 5672561 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 5009237 |
End bp | 5009920 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641243079 |
Product | hypothetical protein |
Protein accession | YP_001508496 |
Protein GI | 158315988 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.600713 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGCGAAG ACAGCACGGC TGGTACGACT CCGCTGCACC TGCGCGGCCG CGACGCGGTC ATCGCCGCCT CCACCGACGC ACGGTGGCGT GACGGGGCCC CGCCGGACTA CCGCTTCTCC CGCGAGGTGA TGCCCGGGGA GCGCACCGTC CACCACACGC CCGGCTCCCT CGCCGACGTC GTCGAGCAGC TCGTGCAGGT GTTCGAGATG GAGCTGTCCT ACAAGAGCGA TCCCACCCAG TGGGTCAGCA TGGTCAGCGA CCGGATCCGG GTCAGCATGA ACGGAGGACC GGCGGCGGAC AGCGCCGAGC TCACCGAGCG GGGCAGCTAC AACGTCCTGA TCGGCGAGAA CCCCTACTAC TCGGCCACCG CGGAGACCTT CGAGTCCTCC CATGAGACCT TCCACCGGGC GTTCCCGGGC GGGTTCTTCT GGGAGGTCCT CGAGGTGTAC TCACCGCCGC CCGTGATCGC CTTCAAGTGG CGGCACTGGG GCACCTTCGC CGGTCCGTAC CAGGGGCACC AGCCGACCGG CGAGCGGATG GAGCTGTTCG GCGTCACGGT CGCCCGCTGC GCGCCGGACC TGCGTCTGCT GGCGGTGGAG AACTTCTACG ACAACACCAC GTTCCTGGGA CGTCTCGCCG GTGCCGACGA GCCGGGGACG GCCGGTCACC CAGGGCGCGC CTAG
|
Protein sequence | MSEDSTAGTT PLHLRGRDAV IAASTDARWR DGAPPDYRFS REVMPGERTV HHTPGSLADV VEQLVQVFEM ELSYKSDPTQ WVSMVSDRIR VSMNGGPAAD SAELTERGSY NVLIGENPYY SATAETFESS HETFHRAFPG GFFWEVLEVY SPPPVIAFKW RHWGTFAGPY QGHQPTGERM ELFGVTVARC APDLRLLAVE NFYDNTTFLG RLAGADEPGT AGHPGRA
|
| |