| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4184 |
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| Symbol | |
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| ID | 5672539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 4974678 |
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| End bp | 4976777 |
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| Gene Length | 2100 bp |
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| Protein Length | 699 aa |
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| Translation table | 11 |
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| GC content | 79% |
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| IMG OID | 641243057 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001508474 |
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| Protein GI | 158315966 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.693929 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.765931 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTTAC GACAGGCGCC ATGGCGACCC GGGCGCGGGC ACGTCCCCCC CGGGCTCGGG
GCGGTGGTGC GCGCCGTCCG CCGGGCGGCG GCCCGCCGTC CGGCCGGTCT CGTCGCGGTG
ATCGGGACGT CTCCGGACGG GACCCGACGC CCCGCCGAGC TTCCCGCCAC CCACCCGGCT
CCAGCCCCGA TCCCGACGCG TCCCGCTCCG GCCCGGGTCG CGCCCGCACG GGCCGAGCCG
CTGCCGATGC CCGCCTTCGG GCGGGTGGCC CCGACCACGA CCGGGCCGCG CGGATGGGCG
GCCCGCCAGG GCCTGGTCCA CCCCTTCCCC GCCCTGCCCA GCCTCCCCGC GGGCCCGCCC
ACGGCCATCG CCTCCGCCGC GGTGCCCCGC GACACCCCGT TCCCGGAGGT GACGGGCGTC
CCCCGCGCCG ATCCGGGTCA CGGCACCTCC GTGGGCCATG GTGCCTCGCT GTTCCTACGG
GACGCCACCT GCCCGGCCTC CGCCCTGCCC GGACCTGACA ACACCCCCGG CCGCACCCCC
GGCCGTGGCG GCGCCGGGCG CCGCTCCCGC AACGAGCCGC GCCCGCGCGC ACGCCCTCGG
TTTCTGCCCC GCCTGCCCAT GCCACCGCCA CCGCGCGGGA GCCTGCGCCC GCCGCGGTGG
CGGCGGCCCG GCGGCGCCGC GGGCCTGCCG CGGCCGCCCG CCGAGCTGAT CGGCATCCTC
GCGGTCGAGG CGCTGTTCCT GTTCGCCGCC GTCGTCCTCG TCGCGAACGC CGCCGCCGAC
CGCTCCCCGC CACGGCCCGC CGAGTTCGCG ACCTTCGCCG CCTTCACCGC ACTGGCCGTC
GTCACCGGGG TGCTGCTCAC CAGCCCCGCC GCGGCCGGCG CCGGGCAGCG CGCCGAAGGC
GCCACCGCCG CCCCCCAGGA CAGCGGTCCG CCCATGACCT CGACCTGGAC GCTGCCGGTC
GCGCTGCTGC TGCCCCCGCT GTACGCGCTG CTCGCGCACG TCCCGCTCTG GCTGGCGACC
GGGGGAGCGG GGCGGCTCGG CCGGCCGGCG GGCCGGGGCG GCTCCCCGCC GCCGGCGCGC
ATCCGGCTGC ACGACACCGC CGCGCTCGGT CTCGCCGGCG CCGCCGCGGC CGCCGTCCAC
CACCTGATCG CACCCACGAC GGACCCGCGG TCCGCGGAGC GGCTCGCCGG CTCGTCGCAC
ACCTTCGCCG CGCTGATCGC GGCGGTCGGC GTCTACGTGC TCGTCGACCG GCTGCTGCGT
CCCGGTCACT GGTCCGGCGG GCGGGAGCAG GCGGTCGCGG TCGCGGTGGA GACCGGCGCC
GCGCTGATCC TCGCCGTCCT GTGGGCGGCC AGCCCACTGC TGCTCGTCGT CGCCGCCCCG
CTCGTCCTGC TGCTGCGCCG CGGGCTGGCC CACGCCGAGC TGCTCACCGC GGCCCGCACC
GACCCCAAGA CCCGGCTGGC GACCATGGCC TACTGGCGGC AGGTCGCCCA GCGCGAGACC
ACCCGGACCC GCCGGCTGGG ACGTCCGCTG TCGGTGCTGC TCGTGGACGT CGACCACTTC
AAACAGGTCA ACGACCGACA CGGGCATCTC AACGGCGACG CGGTGCTGCT CGCCGTCGCC
GACGCGCTGC GCCTGGCCAC CCGGCCGCAG GACCTCGTCG GCCGGTTCGG CGGGGAGGAG
TTCGTCGTGT TGCTCGCCGA GGTCGACCTC GACGCGGCGG CGGCCGTCGC CGAACGCGTC
CGCCACCAGG TCGCGGGGGC CAGCACCCGC CTCGGTCGCG CCGAGGTGAC CGTCACGGTG
TCGGTCGGCG TCGCCTGCAC CAGCCCCGCC CGCCCCGACC CGCTCGCCCA CCAGGCAAGC
CCGGCCGGCC CGGCGGACGG GACCGACGCG GCCGGTCACG GCGCGCCCGG CACCGCCACG
GAACCGGCGT TCCCCGGCCC GCGCGCCGCG GCGCCGGCCA CCGACGACCT CGCCATCCTG
ACCGACCTGC TCGAGCGCGC CGACGCGGCG CTCTACCAGG CGAAACGCGA AGGCCGCAAC
CGCGTGCGCA CCGCCGGAAC GGCCACAGCG GGCGGCGCGC CACCGCGCCC CGCCCGCTGA
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| Protein sequence | MPLRQAPWRP GRGHVPPGLG AVVRAVRRAA ARRPAGLVAV IGTSPDGTRR PAELPATHPA
PAPIPTRPAP ARVAPARAEP LPMPAFGRVA PTTTGPRGWA ARQGLVHPFP ALPSLPAGPP
TAIASAAVPR DTPFPEVTGV PRADPGHGTS VGHGASLFLR DATCPASALP GPDNTPGRTP
GRGGAGRRSR NEPRPRARPR FLPRLPMPPP PRGSLRPPRW RRPGGAAGLP RPPAELIGIL
AVEALFLFAA VVLVANAAAD RSPPRPAEFA TFAAFTALAV VTGVLLTSPA AAGAGQRAEG
ATAAPQDSGP PMTSTWTLPV ALLLPPLYAL LAHVPLWLAT GGAGRLGRPA GRGGSPPPAR
IRLHDTAALG LAGAAAAAVH HLIAPTTDPR SAERLAGSSH TFAALIAAVG VYVLVDRLLR
PGHWSGGREQ AVAVAVETGA ALILAVLWAA SPLLLVVAAP LVLLLRRGLA HAELLTAART
DPKTRLATMA YWRQVAQRET TRTRRLGRPL SVLLVDVDHF KQVNDRHGHL NGDAVLLAVA
DALRLATRPQ DLVGRFGGEE FVVLLAEVDL DAAAAVAERV RHQVAGASTR LGRAEVTVTV
SVGVACTSPA RPDPLAHQAS PAGPADGTDA AGHGAPGTAT EPAFPGPRAA APATDDLAIL
TDLLERADAA LYQAKREGRN RVRTAGTATA GGAPPRPAR
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