| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_4087 |
|---|
| Symbol | |
|---|
| ID | 5672445 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 4867725 |
|---|
| End bp | 4868375 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 641242963 |
|---|
| Product | carbonic anhydrase |
|---|
| Protein accession | YP_001508380 |
|---|
| Protein GI | 158315872 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0288] Carbonic anhydrase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.00019736 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCTGCGCG TGCCCGATTT CGATCTCGCT GTTTCCTCGC CCGCTGAGGC GTTCACGGTC
CTGAGGGAAG GCAACGCGCG CTTCGTGCGT GGTGAACGGC TGCACCCGAA CCAGGATGCT
GACCGTCGAT CGGCTGTGGC GCCGAGACAG CATCCGTTCG CCGTGCTGTT CGGATGTTCT
GATTCCCGCC TGGCAGCTGA GATCATCTTC GACCGGGGAT TGGGGGATCT CTTCGTGGTG
AGGACCGCCG GTCACGTCGC CGGGCCTGAG GTTCTGGGCA GCATCGAGTA CGGCGTCAGC
GTGCTCGGCG CGCCACTCGT CGTCGTTCTC GGGCACGATT CGTGTGGCGC TGTCACCGCG
GCGTCCGAGG CAGATCGTGA CGGGACCGCG CCTGCGGGCT ATCTCGGGGA CGTGGTCGAG
CGGGTGATGC CGAGTGTGTT GTCGGCGCGG GCGGCCGGAC ACACTGACAT CGACGCGTTC
GTGCGCACGC ATATCCGGCG GACGGTCGAC GGCCTGGTCG GCCGGTCAGT CCTGCTCGCG
GCCGAGGTCG CCGCAGGACG ATGTGCGGTA GTCGGTCTGT CCTACCGGCT CGCTGAGGGC
ACCGTCGGCG TTGTCACCAG CCACGGGCCT GTACCCGCAG CCACCCGATG A
|
|---|
| Protein sequence | MLRVPDFDLA VSSPAEAFTV LREGNARFVR GERLHPNQDA DRRSAVAPRQ HPFAVLFGCS
DSRLAAEIIF DRGLGDLFVV RTAGHVAGPE VLGSIEYGVS VLGAPLVVVL GHDSCGAVTA
ASEADRDGTA PAGYLGDVVE RVMPSVLSAR AAGHTDIDAF VRTHIRRTVD GLVGRSVLLA
AEVAAGRCAV VGLSYRLAEG TVGVVTSHGP VPAATR
|
|---|
| |