Gene Franean1_4069 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_4069 
Symbol 
ID5672427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4850911 
End bp4851387 
Gene Length477 bp 
Protein Length158 aa 
Translation table11 
GC content70% 
IMG OID641242945 
Product3-demethylubiquinone-9 3-methyltransferase 
Protein accessionYP_001508362 
Protein GI158315854 
COG category[S] Function unknown 
COG ID[COG3865] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0386051 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGAAGA CCATTCCCTG CCTGTGGTTC GACACCGACG CCGAGGAGGC CGCCGCGCTC 
TACGTCTCCG TCTTCCCGAA CTCGGCCATC ACCGGCGTCA CCCGTTACGG GCCGGGCATG
CACCGACCCG AGGGCCTGGC CCTGACCGTC TCCTTCACCC TCGACGGGCA GGAATACGTC
GCGCTCAACG GCGGACCGGA GTTCACCTTC TCCGAGGCGA TCTCGTTCCA GATCCCCTGC
GCCGACCAGG CCGAGGTGGA TCACTACTGG AGCGCCCTCA CCGACGGCGG CGGCAAGGAG
AGCCAGTGCG GCTGGCTCAC CGACCGTTTC GGCCTGTCCT GGCAGGTCGT CCCGACCCGG
CTGACCGAGC TGGTCAGTGA CCCCGACCCG GAGCGCGCCC AGCGCGCCAC CCAGGCGATG
CTCACCATGG GGAAGATCGA CATCGCCGCG ATCGAGCGCG CCGCCGACGG CCGGTAG
 
Protein sequence
MPKTIPCLWF DTDAEEAAAL YVSVFPNSAI TGVTRYGPGM HRPEGLALTV SFTLDGQEYV 
ALNGGPEFTF SEAISFQIPC ADQAEVDHYW SALTDGGGKE SQCGWLTDRF GLSWQVVPTR
LTELVSDPDP ERAQRATQAM LTMGKIDIAA IERAADGR