Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_4007 |
Symbol | |
ID | 5672366 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 4788520 |
End bp | 4789389 |
Gene Length | 870 bp |
Protein Length | 289 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 641242884 |
Product | gas vesicle synthesis GvpLGvpF |
Protein accession | YP_001508301 |
Protein GI | 158315793 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.958906 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTGTCG TGCTGTACGG AATCGTCCGG GCAGGCCATC CCCTCCCGGA CCCGGACCCG GATCCGGACC CGGACGCGGC GCTCGGCATC GGCCATCCGC GCGCGCCACT GCGGCTGGTG CGTTCGGGCC CCCTCGCCGC GGTCGTCAGC GGGACGGCGG ACATCGGCGA GCTCGGGGAA CAGGAGGCCG TCAGACACCT GGAGATCCTC CAGCGGCTGC TCGTCGACGG CCCGGTGCTG CCGGTACGGC TGGGAACGGT CGCGCCGGAC GACGGCGCCG TCCGGACGGA GGTACTCGAA CCGGTCAGTG ACAGCCTTCC CGAGCAGCTG GACGCGATCG ACGGTCTGGT CGAGCTGCAT GTCGACGTCG AAGAGGCGGA ACAGACCGAG CTCGCGGAGG CGGTGGCCGC CACCTCGCTG GCCCACGCCC CGCCCCCGGA GGACCTGGAC GGCCGGATCC AGCTGGGGCA ACAGATCGCG GAACTCGTCG TCGCGCGCCG CACGGAACAG GCGCGGGCGA TTCTGGACGA GCTGCGCCCG CTGGCACACG CGGACCGGCC ACGCAGGCAC CACGGGGGGC CGGAGGATCC CGCTCTCAGC TGGGCGTTCC TCGTCCCCGC CGACGCACTG GCCGACTTCG ACGCCGCTGT GGAGCGGATC CGTGCGACCC GTCCGCACCT GACCGTCGAG TACGTCGGAC CGCTACCCGC GGTCGACTTC GTCGAGTTCC CCGCCCGAGT ACTCACCGAA GCCCGCGAGG CCGCCGCGGA CGGCGGCTCC TTCGGCGGGT CGGGCCGATG GGGCTGGGGC GAGGACAGAA CCGGGTCTGA CCGACCGAGC AAGGCCCGGG AGAGAGAGGA GCCTCGATGA
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Protein sequence | MPVVLYGIVR AGHPLPDPDP DPDPDAALGI GHPRAPLRLV RSGPLAAVVS GTADIGELGE QEAVRHLEIL QRLLVDGPVL PVRLGTVAPD DGAVRTEVLE PVSDSLPEQL DAIDGLVELH VDVEEAEQTE LAEAVAATSL AHAPPPEDLD GRIQLGQQIA ELVVARRTEQ ARAILDELRP LAHADRPRRH HGGPEDPALS WAFLVPADAL ADFDAAVERI RATRPHLTVE YVGPLPAVDF VEFPARVLTE AREAAADGGS FGGSGRWGWG EDRTGSDRPS KAREREEPR
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