| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3988 |
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| Symbol | |
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| ID | 5672348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 4772891 |
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| End bp | 4774339 |
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| Gene Length | 1449 bp |
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| Protein Length | 482 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641242866 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001508283 |
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| Protein GI | 158315775 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.958906 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGATAG CCGCGCACCC TTCGGCCGAG CCGGCCCCGA CCACAGCTGA CCCGCTGCGT
TGGCGGGCAC TGGCCGCGAT AGCCGCCGGC CAGCTCATGA TTGCGGCAGA CGTCACGATC
ATGAATATCG CACTGCCGTC CGCCCAGCAC TCCTTGCACC TGTCAACGGC GCAACGACAG
TGGGTGATCA CCCTCTTCGC TCTCGCCTAC GGCGGGTTCC TCCTGCTCGG GGGCAGACTG
TCCGATCTGA TCGGTCGCAA GCGCTGCCTG CTGATCGGAC TGGCGGGTTT CGCCGCAGCC
TCGGCGCTGG GTGGGGCAGC CGTGAACCCA ACCATGCTCC TGGTTGCTAG AGCGCTCCAG
GGCATATTCG GGGCGCTGTT CACACCCTCC GCCCTCGCGC TGCTCGGTAC GACATTCACC
GAACCCTCCG AACGCGGCAA AGCCTTCGGG ATCTACGGCA CCGTGATGGC GGGCAGTTCC
GGCATCGGAC TGATCCTCGG CGGCGTCCTC ACCAACTACC TCGACTGGCG CTGGTGCATG
CTCGTGAGCC TGCCCATCGC GGTCGGCGCT GCCGCCGGAG TCAGCGCGAC GGTTCGCGCG
ACCCCCCGCC GGCTCGGCAC CGAGGTAGAC ATCGTCGGCG CGGTGCTCGC CACAACCGGG
CTCATGGCAC TGGTCCTTGG ATTCACCCGC GCGGAGTCAC AAGGCTGGGC CACCCGGATC
ACGCTGGGCG TTCTTGCCGC CGGAGTCATC CTTCTCGCGC TGTTCGTCCT AGTGGAAAGC
CGCACCGGAG CGGCCCTCCT GCCGCTGCGG GTCGTCCGTG AGCGTCGACG AGCCGGTGCG
TACCTGGCCG TCCTGTGCAT GGCGATCGGC ATGTTCGCCG GATTCTTCTT CCTCACCTTC
TACCTGCAGG ACATCCTCGG ATACTCACCG ATCAAGGCAG GACTCGCGTT CCTCCCGTTC
ACTGCGGCGA TCATGCTAGG AGTACGCGTC ATCCGCGGGT TCCTGATGCG CGCACCCCTG
CGGCTGCTGC TGTGCCCGGG TCTCCTGGCA TGCGCGGCCG GACTCGCACT GCTCGGCCTA
CTACGCGCCG ACGGCGGCTA CGTCACCGGG GCGCTTCCCG TCGTCGTGCT GCTCGGACTC
GGTGTCGGCT GTGTGCTGCT GCCTGCCAAC AACATCGCGA CTCTCGGCGC GGGCCCGGAC
ACCGGCGTCG CCGGCGCCAT CGTGATGACC TCCCAACAGA TCGGCGCCTC GCTCGGCACC
GCCCTGCTCG GCAGCATCGC CGCTACCGCC ACCACCGCCT ACGTCCACTC GCACGCCGCC
GCGGCCGACC TCCCCGCACG GGCCGCGGTG CACGGCTACA ACGTAGCCGG CCTCTCCGGC
GCCGCCTTCC TGTGCCTCGC AACGACCCTG GTGTTCCTCC TTACCGGTCC GAGGAACCCC
AACCAATAA
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| Protein sequence | MRIAAHPSAE PAPTTADPLR WRALAAIAAG QLMIAADVTI MNIALPSAQH SLHLSTAQRQ
WVITLFALAY GGFLLLGGRL SDLIGRKRCL LIGLAGFAAA SALGGAAVNP TMLLVARALQ
GIFGALFTPS ALALLGTTFT EPSERGKAFG IYGTVMAGSS GIGLILGGVL TNYLDWRWCM
LVSLPIAVGA AAGVSATVRA TPRRLGTEVD IVGAVLATTG LMALVLGFTR AESQGWATRI
TLGVLAAGVI LLALFVLVES RTGAALLPLR VVRERRRAGA YLAVLCMAIG MFAGFFFLTF
YLQDILGYSP IKAGLAFLPF TAAIMLGVRV IRGFLMRAPL RLLLCPGLLA CAAGLALLGL
LRADGGYVTG ALPVVVLLGL GVGCVLLPAN NIATLGAGPD TGVAGAIVMT SQQIGASLGT
ALLGSIAATA TTAYVHSHAA AADLPARAAV HGYNVAGLSG AAFLCLATTL VFLLTGPRNP
NQ
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