| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3940 |
|---|
| Symbol | |
|---|
| ID | 5672301 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 4708637 |
|---|
| End bp | 4709920 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | 641242819 |
|---|
| Product | cytochrome P450 |
|---|
| Protein accession | YP_001508236 |
|---|
| Protein GI | 158315728 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2124] Cytochrome P450 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.0174987 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGGCC CCGCCACGAG CACACCGCAC GCTGTCGCGG GCGCGCCCGC GGTGCCCGAC
GCGGAGGCGG TGCTCGCGCA GGCCGTGATC GAGTCCTTCG ATCCGGCGTG GCGGCACGAC
CCCTATCCCG CGTACGGCAC GCTGCGCCGG GCCGGCACCT TCCTGCCGGG CCCGCTGGCC
GGCACCATGC TCGTCCCCGG CCATGCCGAG TGCGCCGCCA TCCTCGCCGA CCCGGTGTGG
AGCCACGCCG AGGAGTCGGA GCTGCTCCAC CCGGACAGTG ATGTCGAGCT GCCCGGCTCG
TTCCTGTGGA TGGAGCCGCC GGACCACACC CGGCTGCGCG GCCTGGTGAG CCGGGCGTTC
ACCCCACGGA CCATCGAGGC GACCCGCCCG CTGGCCCGCC GGGTCGTGGA CGGGCTGATC
GACGACGCCC TGGCGGCGGG GGAGCTGGAC CTGATCGAGG GGCTCGCCTA CCCGCTGCCG
CTGACCATGA TCTGCGAGCT GCTCGGGGTG CCCATCTCCG AGCACCCCGC GGTGCGCCGG
ATGTCGGCCG GGATCGCGCG CGGGCTCGAC CCCGACGTCC TGCTCTCACC GGCCGAGCTC
GCCGCGCGGA CCGCCGCCGT GGAGGAGTTC CGCGAGTTCT TCGGCGCGCT AGTCACCGCC
CGCCGGGCCG ACCCCCGCGA CGACCTGATC AGCGCGCTCG CCCAGGTGCA CGCCGAGGGT
GACCGGCTCA CCACGACCGA GCTGCTCGGC ACCCTGCTGA TCCTCGTGGT CGCCGGGCAC
GAGACCACCG TCAACCTGAT CGGCAACGGG GTGCTCGCGC TGCTGCGTGA CCCCGCGCAG
CTCGACGCGC TGCGGCGCGA TCCCGGGCTC GCGCTGCCCG CGGTGGAGGA GATCCTGCGG
TTCGACGCGC CGGCGCAGGT GACCACGCGC ACCGCCCGGG CGGAGGTGAC CGTGGCGGGC
CGGACGTTCA CCCCCGGCGA GGCCGTCATC TGCATGCTCG GCTCGGCCAA CCGTGACCCC
CGCGCCTTCG ACCGGCCCGA CGAGTTCCTC GTCGACCGCT ACGCGGGCGG CGCGCGGGTG
AGCCGCCATC TCGCCCTCGG GATGGGCCTG CACTACTGCC TGGGTGCCCC GTTGGTCCGG
CTCGAGGTCG GTGAGGTGCT GCGGGGCATC GCCACCCGCC TGACCGGGAT GACCCTGCTG
GCCGATCCGC CGCCGTACCG GCCGAACATC GTCGTCCGTG GGATGTCGTC GCTGCCTGTG
CGGGTCACCG GCCGACCCGG CTGA
|
|---|
| Protein sequence | MTGPATSTPH AVAGAPAVPD AEAVLAQAVI ESFDPAWRHD PYPAYGTLRR AGTFLPGPLA
GTMLVPGHAE CAAILADPVW SHAEESELLH PDSDVELPGS FLWMEPPDHT RLRGLVSRAF
TPRTIEATRP LARRVVDGLI DDALAAGELD LIEGLAYPLP LTMICELLGV PISEHPAVRR
MSAGIARGLD PDVLLSPAEL AARTAAVEEF REFFGALVTA RRADPRDDLI SALAQVHAEG
DRLTTTELLG TLLILVVAGH ETTVNLIGNG VLALLRDPAQ LDALRRDPGL ALPAVEEILR
FDAPAQVTTR TARAEVTVAG RTFTPGEAVI CMLGSANRDP RAFDRPDEFL VDRYAGGARV
SRHLALGMGL HYCLGAPLVR LEVGEVLRGI ATRLTGMTLL ADPPPYRPNI VVRGMSSLPV
RVTGRPG
|
|---|
| |