| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3927 |
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| Symbol | |
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| ID | 5672288 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 4696466 |
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| End bp | 4697227 |
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| Gene Length | 762 bp |
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| Protein Length | 253 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641242806 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001508223 |
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| Protein GI | 158315715 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.329406 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0794369 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGCTG CCCAGGACCG CGTCGCGATC GTCACGGGGG CCGCCCGCGG CATCGGTGCC
GCCACGGCGC GCCGGCTCGC CGCCGACGGC ATGGCCGTGG CGGCGCTCGA CCTGGAGGAG
AGCGCGTCGA AGGGCACCGT CGAGGCGATC GTCGCCGCCG GCGGGACCGC GATCGCCCTC
GGCGTGGACG TGAGCGAGGC CGAGCAGGTC ACGGCCGCGG TGGAGCGGGT GGCCGCCGAG
CTCGGCGGGC CGACCGTCCT GGTGAACAAC GCCGGGATCA CCCGCGACAA CCTGCTGTTC
AAGATGTCCG AGACCGACTG GGACCTCGTC ATGGGGGTGC ACCTGCGGGG CACGTTCCTG
ACGACCCGCG CCGTGCAGAA GTTCATGGTC GAGGCGGGCT TCGGGCGGAT CGTGAACCTG
TCGAGCACGT CGGCGCTGGG TAACCGCGGC CAGGCGAACT ATTCGGCGGC GAAGGCGGGC
CTGCAGGGAT TCACCAAGAC GGTGGCGATC GAGCTCGGGA AGTTCGGCGT CACCTGCAAC
GCGGTGGCGC CCGGTCTGAT CGCGACCGAG ATGACCCGGG CGACGGCCGA GCGCCTGGGG
CACACGTGGG ACGACTACGC CGCCGCCCGC GCGGCCCAGA TTCCCGTGGC CAGGGTCGGC
GAGCCCGAGG ACATCGCCCA CACCATCTCG TTCCTGGTGA GCGAGGGCGC GGGATTCGTG
TCCGGTCAGG TGATCTACGT CGCCGGTGGG CCGAAGGCGT GA
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| Protein sequence | MPAAQDRVAI VTGAARGIGA ATARRLAADG MAVAALDLEE SASKGTVEAI VAAGGTAIAL
GVDVSEAEQV TAAVERVAAE LGGPTVLVNN AGITRDNLLF KMSETDWDLV MGVHLRGTFL
TTRAVQKFMV EAGFGRIVNL SSTSALGNRG QANYSAAKAG LQGFTKTVAI ELGKFGVTCN
AVAPGLIATE MTRATAERLG HTWDDYAAAR AAQIPVARVG EPEDIAHTIS FLVSEGAGFV
SGQVIYVAGG PKA
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