| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3871 |
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| Symbol | |
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| ID | 5672234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 4601008 |
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| End bp | 4602132 |
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| Gene Length | 1125 bp |
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| Protein Length | 374 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641242749 |
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| Product | putative sulfonate binding protein precursor |
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| Protein accession | YP_001508169 |
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| Protein GI | 158315661 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.080113 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.159849 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGGGATG AGGGCAGACT GCCCGCAGGC CGTGACGCTA CGCCCGCGCC GTCCGTTCCG
CTACGAGTCC TCATGATCGG CCGTCCGGCC GGACGCCGGT CCCGACGGCT GCTGGTGGTT
GTTCCCCTCG CCCTGGTCGG ACTGCTCGCG GCGGCCTGCG GCGGGAGCGA CCCGGCGCCG
GGTACGGCCG CGGCGGCGGC GAACGACCTC TCCGGCGTCA CACTGCGTTT CGGTGACCAG
ATCAACGGGG TCCGCTCCGT GCTGGAGGCC TCCGGCGAGC TGGACGACGC ACCGTACAAG
ATCGAGTGGA GCCAGTTCCA GGGCGGTGGC CCCACGGTGA TCGCGGCGCA GACCGGCGGG
GACGTCGACC TCGGGACGAT GGGGGAGACA CCGGTGGTGT TCGCGCAGGC CGCGCACAGC
CCGGTGACGG TCGTCGGGGC CGCCCGGATC GTCGACCCGG CGAAGTCGAA CTTCGCGCTG
GTCGTGAAGA AGAACTCGCC GATCCGGTCC GTCGCGGACC TGCGCGGCGC GACGATCCTC
AACAGCCAGG GCACGGTGTC GCAGTACCTG GTCGCGAAGG CGCTGGAGAA GGGCGGCCTC
ACGACCGACG ACGTGAAGCT GGTGAACCTC CAGCAGGGTG CGCAGGCCGC CTACGACCGC
GGCGACATCG ACGTCATCGC CAGCGGGGGA CCGCCCCTGG CGATGATGCT GGCGAAAGGC
ACCGACCGGG TCCTCATGAC CGGCGCGGGT GTGCTGCCCG GAGTCAACTA CCTGGTCGCG
CGCAACGGCG CTCTCTCCGA CGCCGGGCTC AGCGACGCCA TCGGCGACTT CCTCGGCCGG
CTCGCGCAGG CGCAGGACTG GTACAACGCC CACCCGGACG CCGCCATCGC GATCGTGAAG
CCCACCTACA AGGTGGACGA CACCGTCGCC CGCGCCATCA TCGACCTCGC GCCCCTGCAC
TACGTGCCGA TCGACAGGAC GGTCACCGAC GCCCACCAGC GCGAGGCGGA CTTCTTCGCC
GACCAGGGCG TGCTGAAGGC GAAGATCGAC ACGTCGACGG TCTTCGACGA CCGTTACAAC
CCGATCATCA ACGCGGTGGC CCAGGGCCGG CCTGGTCCGT CATGA
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| Protein sequence | MGDEGRLPAG RDATPAPSVP LRVLMIGRPA GRRSRRLLVV VPLALVGLLA AACGGSDPAP
GTAAAAANDL SGVTLRFGDQ INGVRSVLEA SGELDDAPYK IEWSQFQGGG PTVIAAQTGG
DVDLGTMGET PVVFAQAAHS PVTVVGAARI VDPAKSNFAL VVKKNSPIRS VADLRGATIL
NSQGTVSQYL VAKALEKGGL TTDDVKLVNL QQGAQAAYDR GDIDVIASGG PPLAMMLAKG
TDRVLMTGAG VLPGVNYLVA RNGALSDAGL SDAIGDFLGR LAQAQDWYNA HPDAAIAIVK
PTYKVDDTVA RAIIDLAPLH YVPIDRTVTD AHQREADFFA DQGVLKAKID TSTVFDDRYN
PIINAVAQGR PGPS
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