Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_3846 |
Symbol | |
ID | 5672209 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 4569262 |
End bp | 4570011 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641242724 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_001508144 |
Protein GI | 158315636 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.525033 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.770826 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACGCCG GCCGCGACGC GGGTGGGAGC GTCGCCCCGC ACGCCGGTGG GAACCCCGAT CCGGACATCC GGGTGGTCGT CGCCGACGAC CAGGAGATCG TCCGCACCGG CCTGCGGATG ATCCTCGACG CCCAGCCGGG CATCGTGGTC GTCGGCGTGG CGGTGGACGG CCGCCGGGCC GTCGAGCTCG CACGCCGGCT GCGGCCCGAC GTCTGCCTGA TCGACATCCG GATGCCCGTG ATGGACGGCA TCCAGGCCAC GCTCGCCCTT GCCGGGCCGG GGGTGGCTGA TCCGCTCGCC GTCGTCGTCA TCACCACCTT CGACCTCGAC GAGTACGTCT ACGCCGCGTT GCGGGCCGGG GCCCGCGGCT TCCTGCTCAA GGACGCCGGC CCCGATCTGC TGGCGCAGGC CGTGCACGCC GCCGCCTGCG GCGACGCCCT CATCGCGCCG AACGTCACCG CCCGGCTGCT CGCCACCTTC GCTGGGAGCG GGCCCGCACC GGTGCCGGCG CAGCCGGTCG AGGCGCTGAC CGACCGCGAG GAACAGGTGC TCGCCACCGT GGCGGGCGGC CGGACGAACA GCGAGATCGC CGCCGATCTG CACATCAGCC TCAGCACGGT CAAAACCCAC ATCGCCAGCC TCATGGCGAA GCTCGGCGCC CGCAACCGCG TCGAGATCGC CCTCTGGGCC TACCAGACCG GACGGGTCGA CGTCCGCGGG TCGGGGGCAG GCGGCGCGGG CGGGTGGTAA
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Protein sequence | MNAGRDAGGS VAPHAGGNPD PDIRVVVADD QEIVRTGLRM ILDAQPGIVV VGVAVDGRRA VELARRLRPD VCLIDIRMPV MDGIQATLAL AGPGVADPLA VVVITTFDLD EYVYAALRAG ARGFLLKDAG PDLLAQAVHA AACGDALIAP NVTARLLATF AGSGPAPVPA QPVEALTDRE EQVLATVAGG RTNSEIAADL HISLSTVKTH IASLMAKLGA RNRVEIALWA YQTGRVDVRG SGAGGAGGW
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