Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_3845 |
Symbol | |
ID | 5672208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | + |
Start bp | 4568087 |
End bp | 4569265 |
Gene Length | 1179 bp |
Protein Length | 392 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 641242723 |
Product | integral membrane sensor signal transduction histidine kinase |
Protein accession | YP_001508143 |
Protein GI | 158315635 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4585] Signal transduction histidine kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.5258 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.79155 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGGCCC GGCATGATGC CCGGGTTGGT TACCGTGGCG GGGTGCGCGA TCTCGTCCGT CCGCTGTGGG AGGAGCCGCG TCCGGCGCGC CCGTCGACAC CGGGCCGGCG GGACTGGCCG CTGGCCGCCG CGCTCGCGGT CGCCGCGCTC ACCGAGGGGT TGCTGCGGGC GGACCTTCCG TGGCGGACCT GGTCGGTGCT GCTGGCACTC GCCCTCGTCC CGACCCTGCT GTGGCGCCGG GCGAGGCCGC TGGCAGCGGT CACGATCGCC TTCGGTGCCT CGGCTGTGGC CTCGGTGCTC ACCGGCGGCG GCGTCCCCCA GCTGAACAGC ATGATCTTCA TGCTGCTGTT GCCGTACTCG CTGCTGCGGT GGGGATCGGG CCGGGAGGCC GTGACCGGCG CGGCGGTCGT GCTCGCCGCC GCCGTCTGCA TGATCTCCGC CGCCACCGGT GCCGCCGACG CCGTCGGCGG CGCGGCCGTA CTGCTCGCCT CGTTCGCGCT GGGCGGGGCG TTCCGGTACC GGGCCGGGGC CCGGCTGCGC GAGCTGGAGC AGGCCAAGCT GCTCGAACGG GAGCGGCTGG CCCGGGATCT CCACGACACC GTCGCCCACC ACGTCTCGGC GATCGCGATC CGGGCCCAGG CGGGCATCGC CACCGCGCCG TCGAGCCCGG CCGCCGCCGC CGAGGCACTG CGGGTGATCG AGCTCGAGGC GTCGCGCACC CTGGCCGAGA TGCGGGCCAT GGTCCGGGTA CTGCGCCGTG ACGAGCCGGC GGAGCTGGCG CCGAACCCGA CCGTCGCCGA TCTCGAACGG CTCGCCGGGC AGGCCCGCTC CGGCCCGGCG GTGCGGGTGC GGATCGTCGG CGAGGTGGGG GATCTCCCGC CGTCGGTCGG GTCCGCGATC TACCGGCTCG CGCAGGAGTC GATCACCAAC GCCCGCCGGC ACGCGCGGCA CGCGAACCAC GTCGAGGTCG TGGTGTCCGC CGATGACGCG TGCGTGCGGC TGTCCGTGCG CGACGACGGC GACACCGCCG CCCTGCACCC GCCGCCGTCG CCGGGCTACG GGCTCACCGG GATGATCGAG CGTGCGCGCC TGCTCGGCGG CACCTGCGAG GCCGGCCCCG CCCTCGACCG GGGCTGGACG GTGACCGCCA CCCTGCCCCG GGCCGGGTGG GCGACGTGA
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Protein sequence | MTARHDARVG YRGGVRDLVR PLWEEPRPAR PSTPGRRDWP LAAALAVAAL TEGLLRADLP WRTWSVLLAL ALVPTLLWRR ARPLAAVTIA FGASAVASVL TGGGVPQLNS MIFMLLLPYS LLRWGSGREA VTGAAVVLAA AVCMISAATG AADAVGGAAV LLASFALGGA FRYRAGARLR ELEQAKLLER ERLARDLHDT VAHHVSAIAI RAQAGIATAP SSPAAAAEAL RVIELEASRT LAEMRAMVRV LRRDEPAELA PNPTVADLER LAGQARSGPA VRVRIVGEVG DLPPSVGSAI YRLAQESITN ARRHARHANH VEVVVSADDA CVRLSVRDDG DTAALHPPPS PGYGLTGMIE RARLLGGTCE AGPALDRGWT VTATLPRAGW AT
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