| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3838 |
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| Symbol | |
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| ID | 5672201 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 4560253 |
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| End bp | 4561365 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641242716 |
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| Product | integrase catalytic region |
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| Protein accession | YP_001508136 |
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| Protein GI | 158315628 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.167789 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCCGCCG AACGAGGCCC GCGTCGGGCA GGCTGGACGG CCATGGCGTG GTCGCGGCTC
TACGCCCTGA CGCGCAACGC TCTCGGACTG ATGTTGCTCC GCGTGCGTGG GGACACCTCG
AAAGAGGTGG AGCTCCTCGT CCTGCGACAT CAGGTGGCGG TGCTGCGACG GCAGGTGAAC
CGGCCGGCGC TGGAACCGAA GGATCGGGTG ATCCTCACGG CGCTGTCCCG GCTGCTACCC
CGCGCCCGCT GGGACGTCTT CGTCGTCACC CCGGCCACCG TCTTGCGCTG GCATCGTGAC
CTCCTCGCAC GACAATGGAC CTACCGGAGC AAGAAGCCCG ACCGGCCACC GATCCGACAT
GAGATCCGTG AGCTGGTCCT GCGCCTCGCG CGGGAGAACC CGACCTGGGG CCACCGCCGG
ATCCAAGGAG GACTCGCCGG GCTGGGCTAC CCGGTCGGAG TCGCCACCGT CTGGCGGATC
CTGCACCACG CCGGTGTCGA CCCCGCGCCC CGCCGGGCCG ACGCCTCCTG GCACACATTC
CTGCGCGCAC AGGCCTCCGG CATACTGGCC TGCGACTTTT TCGCGGTGGA CACCGTGTTC
CTGCAACGGA TCTACGTGTT CTTCGTCGTG GAGATCGCCA CCCGCCATGT CCATGTCCAT
GTCCTCGGAG TCACGAAACA CCCGACCGCG GCCTGGGTCA CCCAGCGTGC ACGGACCCTG
CTGATGGATC TCGAGGACCG CGGCCGCCGG TTCCGGTTCC TCATCCGTGA CCGCGACACG
AAGTTCACAG CTTCCTTCGA CACCGTCTTC ACGGCAGCCG ACATCGACGT GGTACGCACG
CCCCCGCAGT CGCCCCAGGC AAACGCGATC GCGGAACGCT GGGTGGGCAG CGCCCGCCGC
GAATGCACCG ACAGACTGCT GATCGTCTCC GAACGGCACC TGACGTCAGT CCTCACCAGC
TACGCCGAGC ATTTCAACAC CCACCGGCCT CACCACTCCC TCGGCCAGCA CCCACCCGAC
CCGCCACCCG TGGTCGCCCC GCCCCTGGGT TCCACCGTCC GTCGCACACG CATCCTCGGC
GGGCTGATCA ACGAGTACCG TAACGCCGCC TGA
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| Protein sequence | MPAERGPRRA GWTAMAWSRL YALTRNALGL MLLRVRGDTS KEVELLVLRH QVAVLRRQVN
RPALEPKDRV ILTALSRLLP RARWDVFVVT PATVLRWHRD LLARQWTYRS KKPDRPPIRH
EIRELVLRLA RENPTWGHRR IQGGLAGLGY PVGVATVWRI LHHAGVDPAP RRADASWHTF
LRAQASGILA CDFFAVDTVF LQRIYVFFVV EIATRHVHVH VLGVTKHPTA AWVTQRARTL
LMDLEDRGRR FRFLIRDRDT KFTASFDTVF TAADIDVVRT PPQSPQANAI AERWVGSARR
ECTDRLLIVS ERHLTSVLTS YAEHFNTHRP HHSLGQHPPD PPPVVAPPLG STVRRTRILG
GLINEYRNAA
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