| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3809 |
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| Symbol | |
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| ID | 5672173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 4523468 |
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| End bp | 4524958 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641242688 |
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| Product | NLP/P60 protein |
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| Protein accession | YP_001508108 |
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| Protein GI | 158315600 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0791] Cell wall-associated hydrolases (invasion-associated proteins) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.100771 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.247532 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGACGT ACACCGCCGC TCAGATCTAC GCTTACGCCC GGGCCGCCGG CTTCACCTCG
GACCAGGCCG TGACGATGAC CGCCGTCGCG CTGGCCGAGT CGGGCGGCAA CGGGATGGCG
CACGCCACCC GGGGCGAGGA CTCGCGCGGG CTCTGGCAGA TCAACATGAA CGCCCACAAG
CAATGGGCGC ACCTGGACGC CTCTGACCCC GCGGTCAACG CCCGGATGGC CTACGAGGTC
TCCCGCCAGG GCCGGGACAT CTCCCCCTGG ACGGTCACCC ACGGCGGCGC GGATGCCCGC
TACCTGGACT ACCGCGCGCA GGCGCAGCGG GCCGCGATCG AGGCCGGGGA CGCGGGCGCG
CAGGGAAACT GGTCGGGGAC CGAGGGCTAC GGGCACGCGG TCGCCGCCGG CGGGGGTGGG
AGTGGGGGCG ACCACACGGC CGGCTTCGCG GCGAGCGGGT ACCCGACGTA CTCGGCCGGC
ACCGGCGGGA ACGGCCCGGG CGGCGCGCAG GTCGGCGAGA CCACCCGGCA TTTCCTCGAC
GCCGCGCTCG CTCAGGCCGG CGACCGCTAC GTGTACGGCG CCGAGGCGCA GCTGAACGAC
GCGGACCCCG ACGCCTTCGA CTGCTCGGAG CTGACCCAGT GGGCGGCGGC GCAGGCCGGC
GTCGAGATCC CCGACGGCGC CGCGAACCAG TACGAGGCCC TGCGCACCGA GGGCCAGGAG
GTCTCCGTCG ACGAGGCCCT GCGCACGCCC GGCGCGCTGC TGTTCCACGC CGACGCGAGC
GGCTACGTCA GCCACGTCGC GATCAGCCTC GGTGACGGGC GGACGATCGA AGCCCGCAAC
TCCCGCCTCG GCGTCGGGGT GTTCGACGGA CGGGAGAACT GGCTCAACCG GGCGGCCGTC
CTCCCCGGAC TGTCCGGGGA GGTCGGCGCG GGCGCGTTCG CGGCCGGGCC CGGAACCGGC
CTCGGGGCCG GGGGGGCCGC TGACGGTACC GACAGCGACG CGGACGGGCT CACCGACGCC
CTGGAAGCGT CGCTCGGCAG CAACGCCCAT GAGGTGGACA GCGACAGCGA CGGCTTGTCC
GACTCCTACG AACTGCTGCG CGTGCACTCG GACGTGATGT CGGCGGACAC CGACCACGAC
GGTCTGGCGG ACGCGCTCGA TCTGGCCTCC GGCTTCGACC CGACGAACGC GGACAGCACC
GGCACCGGTC GTCTGGACGG GGCGACCGGC GAGGCGGCCA GCCTCGACAC CGACGACGAC
GGGCTCGCCG ACGCGCTCGA GCGGGTCCTC GGCACCGACT CGACTCTGGC CGACAGCGAT
CACGACGGGG TGACCGACGG CGCGGAGCAC CTGAACCGCA TGGACCCGCT CGACCTGAAC
GACGTGGGGT CGCTGGTGCA CAGCGCGGAC ACCGGCGCTG GGACGGGAAC CGACCTCGGT
GCCACCCACC CCCCGGGCGG CACCGACCTC GACGGCACCA CCCACCTCTG A
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| Protein sequence | MATYTAAQIY AYARAAGFTS DQAVTMTAVA LAESGGNGMA HATRGEDSRG LWQINMNAHK
QWAHLDASDP AVNARMAYEV SRQGRDISPW TVTHGGADAR YLDYRAQAQR AAIEAGDAGA
QGNWSGTEGY GHAVAAGGGG SGGDHTAGFA ASGYPTYSAG TGGNGPGGAQ VGETTRHFLD
AALAQAGDRY VYGAEAQLND ADPDAFDCSE LTQWAAAQAG VEIPDGAANQ YEALRTEGQE
VSVDEALRTP GALLFHADAS GYVSHVAISL GDGRTIEARN SRLGVGVFDG RENWLNRAAV
LPGLSGEVGA GAFAAGPGTG LGAGGAADGT DSDADGLTDA LEASLGSNAH EVDSDSDGLS
DSYELLRVHS DVMSADTDHD GLADALDLAS GFDPTNADST GTGRLDGATG EAASLDTDDD
GLADALERVL GTDSTLADSD HDGVTDGAEH LNRMDPLDLN DVGSLVHSAD TGAGTGTDLG
ATHPPGGTDL DGTTHL
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