| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3744 |
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| Symbol | |
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| ID | 5672109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 4433201 |
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| End bp | 4435699 |
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| Gene Length | 2499 bp |
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| Protein Length | 832 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 641242625 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_001508045 |
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| Protein GI | 158315537 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.726032 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTCGCT GCCCGGCGAC GGCGCTGGCC GCGGCCCGCC TGAAGGCGGT GAACGTGATG
GTCGACGCGT CCGCGCCGCC AGTCGATCAA CCGCGGACGG TACCGCGCCA GGCGGCGGCC
GGCAGCGGCT ACTTCTGGCC GGCGGTGGTG ATCAGCGTGC TGCTGGTCGT CGGATCGGCG
GTCGTCGCGG TCGCCCTGCC GGCCCGGCCG GCACTTCTCA CCGTCCGCCT GATCATGATC
TTCTGTCTGC TGCTGGGCGG CGGGACCTGC GTCGTGACGG GCCTGCGCCG GCGCGGCGCG
GAACGCGCGT GGCGGCTGCT GGTCGCGGGG ATGGTGCTGG GTATCGGCGC CGGCGCGGCG
GAGATGTTCC CGGCCATGGC CAGCCGCGGG CCACCGGTCC CGCGGCAGGA CGCGTCCTCG
CTCGCCTACC TGATCCCGCA GGCGTTCGGG CTGGCCGGAG TGCTGTGCTA CCCGACCGAC
CCGTTCGACC TGTCACTGCG GCCGCCGGGG CGGGGCCGCG ACCGCCGCTG GTACGTGATC
ACGATCATGG ACGGTCTGAT CGTGGCCGGC GCGGTGACGC TGCTGGCCTG GATCGCCATC
CTCGAGGACG CGATCGCGGC GCGGGGGCCG CTGGGTGACG GGCCCATCTA CTCGATCGTC
CTGTCCGCCA ACACCCTGAT CATCGCCGTG GTGGTGATCC TGGTCGCGGT GTTCCGCCAG
CCGCGCTCCG GCGGTGGCCT GAGCCTGCTG ATCATGGGGC TGCTCACCGT CACGGCCTCG
ATCGCCAGTT ACATGGCGGT GGTCGTCCGT GGTGGGACGG ATGTCCCGCG GCTGCTGGAC
CTGCTGCTGA TCGCCGGGCC GCTGCTGGTC GGGCTGGCGG CGCTGGCGCC GGAGACGTCC
CGGCCGTGGC GCGCCGCCGT GGACGGGAGC GGTGACACGT TCGTCCCCTC GCGGCGCCGG
CGGTGGCACG CCATGTTGCC GTACCTGCCG CTGGCCGCGG CCGGCGTCGC GACGCTGCTC
GAGCTCTCCG GGGAGGACCT CGCCCAGCAG GAGGAGATCT GGGCGCTGCT CGCCCTGCTG
CTGATCGCGC TGCTCCGGCA GATGACCACG ATGAGCGACA ACATCCGCCT GCTCGGCCAG
GTGGAGGAGA AGCAGCACCA GCTGCGCTAC CAGGCGTTCC ACGACCCGCT CACCGGGCTC
GGGAACCGCG CCCTGTTCAC CGAACGGCTC GACTCGGCGC TGCGCCGCCG TGGCCCGGGC
ACCGGACGTC TAGCGGTGCT CTTCTGCGAC CTGGACGGAT TCAAGCGGGT CAACGACGAG
TTCGGGCACG CCGCCGGCGA CGACCTGCTG CGGGTGACCG CCCGTCGGCT GGCCGGGTGC
GTGCGGCCGG CGGACACGGT CGCCCGGCTC GGCGGGGACG AGTTCGCGAT CCTGCTGGAC
GCCGACGCCG AGGATCCCGG ATCAGTGGGG CGGCGGCTCG CCGCCGCGGT GCGGGCGCCG
GTCCGGCTCG CCGACACCAC GTTCACCGTC GCGGCCAGCA CCGGCCTCGT CGTCGTCGAC
CCGGCCGCCG GGCCCGTCAC CGCGGACGCC CTGCTGCACC GCGCCGACCT GGCCATGTAC
GCGGCGAAAG CCCAGGGGGA CGGGCGGCAG ACGGTCTACA CCCCCGATCT CGCCGTGCCG
CGCTCGGGCT CCGCGCTGCG GGCCGCGCTT GACGCCGCGG CCCGCGGTGA GCCCGCCGAC
GGCCGGCTCG CCGTGATCTA CCGGCCCATC ATCGACCTCA CCACCGCCAC CCCGGTAGCC
CACGAGGCGC GCCTCGCCTG GGTACACCCC GACCTCGGCG CCACCCGGCT GCTCCCCGCC
GACGACGCCC TCGGCCTGGT GCCGGCCCTG GACCGGATCC TGCTGCGCGC TGCCTGCCGT
GCGGACGGGT CGGGCCGTCC GCTGCCCGTG CACGTCACGA TCTCCGCCCG CCGGGCCGGC
CAGCCGACCC TCGTCGACGA CGTCGCCGCC GCGCTGCGGG CGGCGGACCT GCCGCCCGCC
GGCCTCGTCC TCCAGATCCG CCCCACTCCG CGCGCCGCCG GCCCGGCCGA CTTCGGTGAC
GTAGTCAGCC GCGTCCGCGC CAGCGGGGTC CGGATCGGGC TCGCCGAGAT CGGGGCACCG
GACACCCTGA TCGACGCCGC CATCGGCATT CTTGGCAGTG CCCCGGTGGA CATCATCACC
GTCCATTCCG ACCTCACCGC GACCTGGACG GCTCCCGGCC GCGATGATCC GGCCGCGGCC
CTCGCCCGCA CCGGCCTCGC GACCCTGATC GGTCTCGGCA TCACCGTGGT CGCTGACGGG
GTGGATGGCC CGGCCACCGC GGCCCGCCTG CGGGAACGCG GCTGCCGGCT GGCCTTCGGT
GATCCCTGCG GTCGTGCCCT CCTGCCAAAC CCGCTCCCGC ATGCCGACGC AGCCGATCAT
GCCGACCCCC GTCATGCCGA CCGGTGCCGA TCGCCGTGA
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| Protein sequence | MGRCPATALA AARLKAVNVM VDASAPPVDQ PRTVPRQAAA GSGYFWPAVV ISVLLVVGSA
VVAVALPARP ALLTVRLIMI FCLLLGGGTC VVTGLRRRGA ERAWRLLVAG MVLGIGAGAA
EMFPAMASRG PPVPRQDASS LAYLIPQAFG LAGVLCYPTD PFDLSLRPPG RGRDRRWYVI
TIMDGLIVAG AVTLLAWIAI LEDAIAARGP LGDGPIYSIV LSANTLIIAV VVILVAVFRQ
PRSGGGLSLL IMGLLTVTAS IASYMAVVVR GGTDVPRLLD LLLIAGPLLV GLAALAPETS
RPWRAAVDGS GDTFVPSRRR RWHAMLPYLP LAAAGVATLL ELSGEDLAQQ EEIWALLALL
LIALLRQMTT MSDNIRLLGQ VEEKQHQLRY QAFHDPLTGL GNRALFTERL DSALRRRGPG
TGRLAVLFCD LDGFKRVNDE FGHAAGDDLL RVTARRLAGC VRPADTVARL GGDEFAILLD
ADAEDPGSVG RRLAAAVRAP VRLADTTFTV AASTGLVVVD PAAGPVTADA LLHRADLAMY
AAKAQGDGRQ TVYTPDLAVP RSGSALRAAL DAAARGEPAD GRLAVIYRPI IDLTTATPVA
HEARLAWVHP DLGATRLLPA DDALGLVPAL DRILLRAACR ADGSGRPLPV HVTISARRAG
QPTLVDDVAA ALRAADLPPA GLVLQIRPTP RAAGPADFGD VVSRVRASGV RIGLAEIGAP
DTLIDAAIGI LGSAPVDIIT VHSDLTATWT APGRDDPAAA LARTGLATLI GLGITVVADG
VDGPATAARL RERGCRLAFG DPCGRALLPN PLPHADAADH ADPRHADRCR SP
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