Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_3710 |
Symbol | |
ID | 5672076 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 4393141 |
End bp | 4393929 |
Gene Length | 789 bp |
Protein Length | 262 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641242593 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001508013 |
Protein GI | 158315505 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.583089 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTCTGA AGGACAAGGT CGCGGTCATC ACGGGCGCAG GCTCGGGAAT CGGCAAGGCG ATAGCTCACC GGTTCGCCGC CGAGGGGGCG AGCGTCGTCT GCGCCAGCGT CAGCGGCCGC GCGGTCGACG TCGCCGCCGA GATCGGCGAC GGGGCGCTCG GGGTGAAGGC GGATGTCAGC GACGAGGCGG ATGTCCGGCG CATGATCGGG GCCGCCGAGG AGGCGTTCGG CCGGATCGAC ATCCTGGTGA ACAACGCCGG GTTCGGCGGC AAGTTGAAGC CGATACACGA GCAGAGTACG GAGGACTGGG ACCGCGTTCA CGGGGTGAAT CTGCGGGGCG TCTTCTTCTG CATGAAGTAC GGCATCATGT CGATGCGCCG GACGGGTGGC GGCTCCGTCG TGAACGTCTC GTCGACGACG GCGGTCATCG GCTGGAAGCA CCACGGGATC TACGGGGCGG CCAAGGCCGG TGTGAACCAG CTGACCAGGG TCGCCGCCCT CGACTACGCC GACGACAACA TCCGGGTGAA CGCGGTGTGC CCGGGCACGA TCTGGACCGG CCTCGTGCAG CTGTCCAAGG AGCACCCGGA GCCGCCGCCG GGGGTGTTCC GCCTCCCCGG GATCCCGATG GACCGCTGGG GCCTGTCCGA CGAGATCGCC GCGGCGACCC TGTTCCTGGC CAGCGACGAG GCGTCCTACG TCACGGGCGT GCTGATGCCG GTGGACGGCG GCTACTCCGT CGGCTTCTCC GGGATGGGCG CCGAGAAGTC GGGCCGGCCC ACCGCCTGA
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Protein sequence | MRLKDKVAVI TGAGSGIGKA IAHRFAAEGA SVVCASVSGR AVDVAAEIGD GALGVKADVS DEADVRRMIG AAEEAFGRID ILVNNAGFGG KLKPIHEQST EDWDRVHGVN LRGVFFCMKY GIMSMRRTGG GSVVNVSSTT AVIGWKHHGI YGAAKAGVNQ LTRVAALDYA DDNIRVNAVC PGTIWTGLVQ LSKEHPEPPP GVFRLPGIPM DRWGLSDEIA AATLFLASDE ASYVTGVLMP VDGGYSVGFS GMGAEKSGRP TA
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