| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3710 |
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| Symbol | |
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| ID | 5672076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 4393141 |
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| End bp | 4393929 |
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| Gene Length | 789 bp |
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| Protein Length | 262 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641242593 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001508013 |
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| Protein GI | 158315505 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.583089 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTCTGA AGGACAAGGT CGCGGTCATC ACGGGCGCAG GCTCGGGAAT CGGCAAGGCG
ATAGCTCACC GGTTCGCCGC CGAGGGGGCG AGCGTCGTCT GCGCCAGCGT CAGCGGCCGC
GCGGTCGACG TCGCCGCCGA GATCGGCGAC GGGGCGCTCG GGGTGAAGGC GGATGTCAGC
GACGAGGCGG ATGTCCGGCG CATGATCGGG GCCGCCGAGG AGGCGTTCGG CCGGATCGAC
ATCCTGGTGA ACAACGCCGG GTTCGGCGGC AAGTTGAAGC CGATACACGA GCAGAGTACG
GAGGACTGGG ACCGCGTTCA CGGGGTGAAT CTGCGGGGCG TCTTCTTCTG CATGAAGTAC
GGCATCATGT CGATGCGCCG GACGGGTGGC GGCTCCGTCG TGAACGTCTC GTCGACGACG
GCGGTCATCG GCTGGAAGCA CCACGGGATC TACGGGGCGG CCAAGGCCGG TGTGAACCAG
CTGACCAGGG TCGCCGCCCT CGACTACGCC GACGACAACA TCCGGGTGAA CGCGGTGTGC
CCGGGCACGA TCTGGACCGG CCTCGTGCAG CTGTCCAAGG AGCACCCGGA GCCGCCGCCG
GGGGTGTTCC GCCTCCCCGG GATCCCGATG GACCGCTGGG GCCTGTCCGA CGAGATCGCC
GCGGCGACCC TGTTCCTGGC CAGCGACGAG GCGTCCTACG TCACGGGCGT GCTGATGCCG
GTGGACGGCG GCTACTCCGT CGGCTTCTCC GGGATGGGCG CCGAGAAGTC GGGCCGGCCC
ACCGCCTGA
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| Protein sequence | MRLKDKVAVI TGAGSGIGKA IAHRFAAEGA SVVCASVSGR AVDVAAEIGD GALGVKADVS
DEADVRRMIG AAEEAFGRID ILVNNAGFGG KLKPIHEQST EDWDRVHGVN LRGVFFCMKY
GIMSMRRTGG GSVVNVSSTT AVIGWKHHGI YGAAKAGVNQ LTRVAALDYA DDNIRVNAVC
PGTIWTGLVQ LSKEHPEPPP GVFRLPGIPM DRWGLSDEIA AATLFLASDE ASYVTGVLMP
VDGGYSVGFS GMGAEKSGRP TA
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