Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_3646 |
Symbol | |
ID | 5672013 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 4321573 |
End bp | 4322580 |
Gene Length | 1008 bp |
Protein Length | 335 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641242530 |
Product | alpha/beta hydrolase domain-containing protein |
Protein accession | YP_001507950 |
Protein GI | 158315442 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0657] Esterase/lipase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.435201 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGTACTT TGGATCATTC GATGCCAGTC ATGGATGAGG AATGCGCGGC CGCGTGGCAG CTTATTCTCG ACAAGTACTT CGGTGGAGCA GCCGGAAGGA TAGACATCAC CGAGGACATC ATTCCCAAAG CACGTGCCCA CAAAATGCCG AGCCGCGAAA TGCTACTCGA AGCATTCCCC TTTACCGAGG AGGAACACAC GATCCCAGGG CCAGAATCAG AGATCACCAT CTCTGTTTTC ACACCCATTG ATCACGGCGG CACCGGCCCG GGAATTTTCT GGATTCATGG TGGTGGAATG GTCACTGGCG ACCGTTTCGG GGTTGTTCCG GCGCTTCGGC TTGCGATGGC GACCGCCGCC GTCGTTGTTT CCGTCGAATA TCGGCTCGCT CCTGAGTATC CCGACCCCGC GCCCGTGGAC GACTGCTACG CCGCTCTACT CTGGACCTTT GATCATGCTG ACGAACTCGG GATCGGCGCC AGTACGCTCG TCCTCGCTGG CGGCAGCGCC GGTGGTGGCA TTGCCGCTGG CACAGCACTT CGCGTGCGCG ACAACGGCGG GCCGCGCATC GCCGGAATGC TGTTGTCGTG CCCGATGCTA GACGACCGGA TGCACACTGC CTCGGCCCAC ATGACCGGCG TACTCCCCTG GAGCCGTACC AGTAACGAGA CCGGGTGGCG CATGCTGCTG GGGGATCGTG CCGGCACCGA CAATGTATCC ATCTACGCTG CGCCCGGCCG AGCGACCGAC CTGTCCGGGC TCCCTCCAAC CTTCATCGAC GTCGGCACCG TCGATCTCTT CCGCGACGAG GACGTTGCCT TTGCCTCAAC GATCTGGGCG TGCGGCGGCG ATGCGGAGAT CCATGTCTGG CCCGGCGGAT TTCACGGCTA TGAGGACTGC GCGCCTAACG CCCCGCTCGC CATAGACACT CTCGTAGCCC GCGAACGCTG GTTGGCGCGA GTCCTCAGTC GTGCCCGTAG CCACGCCACC CAGGCCAACA GCCTTTAG
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Protein sequence | MGTLDHSMPV MDEECAAAWQ LILDKYFGGA AGRIDITEDI IPKARAHKMP SREMLLEAFP FTEEEHTIPG PESEITISVF TPIDHGGTGP GIFWIHGGGM VTGDRFGVVP ALRLAMATAA VVVSVEYRLA PEYPDPAPVD DCYAALLWTF DHADELGIGA STLVLAGGSA GGGIAAGTAL RVRDNGGPRI AGMLLSCPML DDRMHTASAH MTGVLPWSRT SNETGWRMLL GDRAGTDNVS IYAAPGRATD LSGLPPTFID VGTVDLFRDE DVAFASTIWA CGGDAEIHVW PGGFHGYEDC APNAPLAIDT LVARERWLAR VLSRARSHAT QANSL
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