Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_3623 |
Symbol | |
ID | 5671990 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 4294048 |
End bp | 4294920 |
Gene Length | 873 bp |
Protein Length | 290 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641242507 |
Product | helix-turn-helix domain-containing protein |
Protein accession | YP_001507927 |
Protein GI | 158315419 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTAGACC AGCGGAACCG CGGGCCGGTC GCGCTGCGGA TCCTGCTTGG CGGCCAGCTT CGCCGGTTCC GGGAGGAACG GGAAATCACC CGCGAGGCGG CCGGGTATGC GATCCGGAGC TCTGACTCGA AGATAAGCCG GCTGGAGCTG GGGCGGGTCG CGTTCAAAAT TCGCGACATC GAGGATCTGC TCACCCTCTA CGGGGTGGAT GACGAGGCCG TGCGCGCCCC GTTGCTCGCC CTGGCCCGGG AGGCCAACCA GCCCGGCTGG TGGCGCGCCT TCGCCGCCGT CCTGCCGGAC TGGTCCGAGC TGTACCTCGG CCTGGAGACC GCCGCGACGC AGATCCGGGC CTACGAGGCC CAGTTCATCC CGGACCTGCT CCAGACCGAG GACTACGCCC GCGCCGCCAT CGGCCTGAAC AGCAGCCAGT TCGCGGCTCC GCCCGGGGAG CTCGAACGCC GGATCAGCCT GCGGATACGC CGGCAGGAGA TACTGACCCA CCCGGAGGAT CCCGCCACGC TCTGGGTCGT CCTGGACGAG GCGGCCCTGC GGCGCCCGGT CGGCGGGCCG CGGGTCACCC GCGCCCAGAT GAAGCACCTG CTCGCGGTCT CCGAACAGCC GAACGTCATC ATCCAGGTGA TGCCGTTCGC CTTCGGCGGC CACGCCGCGG AAGGCGGCAC CTTCAGTATC CTGCGCTTCG CCGAGCCGGA GCTTTCCGAC GTCGTCCACT GCAGGTACCT CACAGGTGCG GTCTACCTGG ACAAGCCAGC CGACGTGCTC CGGTACTCGG AGGTCATGGG CCGCATGATC GTTGACAGCA CACAACCCGG AGAGTTCGCC GACTATCTGC AGCGAATCCT CGCCGAGGAA TAG
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Protein sequence | MVDQRNRGPV ALRILLGGQL RRFREEREIT REAAGYAIRS SDSKISRLEL GRVAFKIRDI EDLLTLYGVD DEAVRAPLLA LAREANQPGW WRAFAAVLPD WSELYLGLET AATQIRAYEA QFIPDLLQTE DYARAAIGLN SSQFAAPPGE LERRISLRIR RQEILTHPED PATLWVVLDE AALRRPVGGP RVTRAQMKHL LAVSEQPNVI IQVMPFAFGG HAAEGGTFSI LRFAEPELSD VVHCRYLTGA VYLDKPADVL RYSEVMGRMI VDSTQPGEFA DYLQRILAEE
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