| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3564 |
|---|
| Symbol | |
|---|
| ID | 5671933 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | + |
|---|
| Start bp | 4228038 |
|---|
| End bp | 4228460 |
|---|
| Gene Length | 423 bp |
|---|
| Protein Length | 140 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641242450 |
|---|
| Product | HxlR family transcriptional regulator |
|---|
| Protein accession | YP_001507870 |
|---|
| Protein GI | 158315362 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1733] Predicted transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACGA GCGCGAGGCG CGGTCCCTAC GTCTGCGGGA TGGACGCCGG TATGGACGTG
GTGTCAGGGA AGTGGAAGTC GCTGATCCTC TGGGAGCTGA ACAACCACGG AACCCGGCGG
TTCGGAGAAC TGCGGCGCGG CCTTCCCGGC GTCAGCGAGA AGATGCTCAT CCAGCACCTG
CGCGAAATGG AGGAGGACGG CCTGGTCCAC CGCGAGGTGT ATCGCGAGGT GCCTCCCCGG
GTCGAGTACT CCCTCACCGA GCACGGCACA TCGCTCAACG AGGCCCTCCG TCTGCTGGGT
GAGTGGGGGA CGCGACGTTG CGAGCGCCTC GCCGCCGAGG ACGCGCTCAC GTCTACGTCA
CCAGCCGCGC CTCGCCAAGC GTCACCCACC ATGCCGGTGT ACCCGGGTCA GGCGATCATG
TGA
|
|---|
| Protein sequence | MATSARRGPY VCGMDAGMDV VSGKWKSLIL WELNNHGTRR FGELRRGLPG VSEKMLIQHL
REMEEDGLVH REVYREVPPR VEYSLTEHGT SLNEALRLLG EWGTRRCERL AAEDALTSTS
PAAPRQASPT MPVYPGQAIM
|
|---|
| |