| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3555 |
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| Symbol | |
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| ID | 5671924 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 4218201 |
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| End bp | 4219784 |
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| Gene Length | 1584 bp |
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| Protein Length | 527 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 641242441 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001507861 |
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| Protein GI | 158315353 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.21248 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTAAAT GGCTGACCCT GATCACGGTC TCCCTGAGCA CCTTCATGCT GCTGCTCGAC
GTCACGATCG TCAGCGTCGC GGTGCCGGCG ATGGCCCGCG CGCTCGACTC CTCATTCACT
GATCTGCAGT GGACCGTCGA CATCTACGTC CTGGTGCTCG CCGCGCTTCT GATGGCGATC
GGGTCGGCGT CCGACCTCCT CGGCCGCCGC AAGGTCTTCC TGCTCGGGCT GGTCGTCTTC
GCGGCGGCCT CCCTCGCCTG CGGGCTGGCC CCGAACACCG GCTTCCTCAT CGCCGCCCGG
GGGGTGCAGG GGCTCGGCGC CGCGGCCATG TTCGCCACCA ACGCCGCGCT GCTCAGCGCC
ACCTACCGCG GCCGCGACGT CGGTGTCGCC TTCGGGGTGT GGGGCGCGGT CAACGGCGCC
GCCGCGGCGC TCGGCCCGAT CGTCGGCGGC CTGCTCACCG AGCACGTCAG CTGGCGGGCC
ATCTTCCTGG TCAACCTGCC GGTCGCGCTG ATCGCCATCG TGATCGCCCT GCGCTCCGTC
GCCGAATCGC GGGACCGGAT GAGCGGCCGG ATCGACATCC CCGGCACCGT CACGTTCACG
CTCACCGTCT CGCTGCTCAT CTACGGCCTC ATCGAGGCCG GTGACAAGGG CTGGTCGGAT
TCGGTCACCC TCGGGTGCCT CGCCGGCGCC GCCGTGGCCC TGGTGGTCTT CGTCCTGGTG
GAACGGGGCC GGCGCGCTCC CATGCTCGAG CCGCGGCTGT TCCGCGGCCC ATCGTTCTCC
GCGCTCATGG TCGGCGGCTT CGTGCTGACC GGGGCAGCCT TCGCGAACCT GGTGTTCGTG
TCGGTGTGGG CGCAGACCGT CCTCGACTTC GACCCGGTGA AGGCCGGGCT CGTGCTCACC
CCGTTGGCGG GGGTCTCGTT CGTGGTCGCC GGCGCCGGCG GCCGGCTGCT GCACGGCGTG
CCGCCGAGGT ACTCGATCGG GGCGGGCCTG CTGCTGGTCG GGGTCGGTAC GTTCCTCGAC
ATGATCATCG CTCCGTCGTC GGGATGGACC GCGCTGCTGG CCGGACTGAT CGTCACCGGC
GTCGGGGTGG GGCTGGCCTC GCCGGCGCTC GCCTCCGCAG CGCTCACCAC GGTGCCCCCC
GAGCGCGCGG GGATGGCCAA CGGCGCCATG AACACGTTCC GCCAGCTCGG GTTCGCCGTC
GGCATCCCCG TCTTCGGCAC GGCCCTGGCC GGGCAGGCCC GGGCCAGCCT CAGCGACAGC
GGCCAGTTCG ACGACCCGCA GGCCACCGCC AGCGCGCTGT CCGGCGGCGG CGCGCCGGAG
ATCATCGCCC ACGTCCCCGC GGCCGCTCGC GCCGCGGTCG ACCAGGCCCT GCACGCCGCG
TTCGCCGCCG GCCTCGACCG TGTCTTCCTG ATCAGCGGCA TCGCCGGGGT GGTAGCCGGT
GCCGTGGTGC TGCTGCTCGT CCGACCGGAA CAGGCGGCCG CCCGCGCCGC GGCGGACGAC
GGCCCGGCGG ACGCGGTGCC CGGAGGCCCC GCGATCCCGT CGCCCGGGGA CGGCAGCCAG
GTGCCGACGG GGGCGAACGG CTGA
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| Protein sequence | MRKWLTLITV SLSTFMLLLD VTIVSVAVPA MARALDSSFT DLQWTVDIYV LVLAALLMAI
GSASDLLGRR KVFLLGLVVF AAASLACGLA PNTGFLIAAR GVQGLGAAAM FATNAALLSA
TYRGRDVGVA FGVWGAVNGA AAALGPIVGG LLTEHVSWRA IFLVNLPVAL IAIVIALRSV
AESRDRMSGR IDIPGTVTFT LTVSLLIYGL IEAGDKGWSD SVTLGCLAGA AVALVVFVLV
ERGRRAPMLE PRLFRGPSFS ALMVGGFVLT GAAFANLVFV SVWAQTVLDF DPVKAGLVLT
PLAGVSFVVA GAGGRLLHGV PPRYSIGAGL LLVGVGTFLD MIIAPSSGWT ALLAGLIVTG
VGVGLASPAL ASAALTTVPP ERAGMANGAM NTFRQLGFAV GIPVFGTALA GQARASLSDS
GQFDDPQATA SALSGGGAPE IIAHVPAAAR AAVDQALHAA FAAGLDRVFL ISGIAGVVAG
AVVLLLVRPE QAAARAAADD GPADAVPGGP AIPSPGDGSQ VPTGANG
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