Gene Franean1_3487 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3487 
Symbol 
ID5671858 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp4144326 
End bp4145372 
Gene Length1047 bp 
Protein Length348 aa 
Translation table11 
GC content73% 
IMG OID641242375 
ProductBeta-ketoacyl-acyl-carrier-protein synthase I 
Protein accessionYP_001507795 
Protein GI158315287 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0480976 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0154282 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCCCGGTC CCGACATCCA CGTCCTGTCC GCCGGCTCCG CGCTGCCGGG GCCAGCGGTG 
GACAACGCCA CCCTGGCCCA GCGGTTCGGC ATGGACACGC TCTGGCAGCA GTGGATCGAG
GTGTTCATCG GGACCAGGGC CCGGCACCTG GCCCTCGACC TGGAATCCGG CCAGCTCACC
AGCACCCTCG CCGAGCTCGT CGAGCAGGCG GGCCGCCAGG CGCTGGCCGC GGCCGGGCTG
GGGCCCGGCG ACATCGACGC GGTGGTGCTC GGCACCGCCA CCCCCGACCA GCTCATGCCG
GCCACCGTGA ACATCGTCGC CGACCGGCTG GGCATCAACG ACGTCCGGAC CTACCAGTTG
CAGTCCGGGT GCTCCGGTGC CGTGCAGGCG CTGGATGTGG CGCGCCAGAT CCTGCTGGCC
GGCAGCGGCC GGCGGGTGCT GGTCCTCGGC GGCGACGTGA TCGCCCGGTT CTACGACGTC
ACCGCCGACC TGCGCAAGCT ACCGCCCGCG CAGCTCGTCA ACTACGTGCT GTTCGGGGAC
GCGGCCGGCG CGGCCGTGCT GTCGACCGAG CCGGGGCCCG GCTCGGCGGT GGTGCGGGCG
CTGTTCACCC GGCTGGTCGG GCTCGGCCGT CCGCCCGGCG CGACGCTGGA GTGGTTCGGG
CCGACCGACC GCGACAGCAC CCGCCCGGCC GCGACCGAGG ACTACAAGGC CATCGAGCAG
CACGTGCCGG CGATGACCGG CGAGGTGCTC GAGGAGCTGC TCACCGCCAC CGGCTGGAGC
CCCGGCGAGG TGGACCTGCT GCTGCCGCCG CAGCTGTCCG GGCGTATGAC CAGGCTGATC
ACCGAGAAGC TGGCGCTGCC CCGGGCCGGT GAGGTGACCG TCGTCGACGA GGCCGGCAAC
TGCGGCAACG CGATCGTCTT CCTCCAGCTG GAGCGGGCGC TGGCCAAGCT CGGCGCGGGT
GAGCGGGCGG TCGGCGTCTC CATCGAGTCC AGCAAGTGGA TCAAGGCCGG CTTCGCCCTG
CAGGGCGGCG GAGGGGAATC CCGATGA
 
Protein sequence
MPGPDIHVLS AGSALPGPAV DNATLAQRFG MDTLWQQWIE VFIGTRARHL ALDLESGQLT 
STLAELVEQA GRQALAAAGL GPGDIDAVVL GTATPDQLMP ATVNIVADRL GINDVRTYQL
QSGCSGAVQA LDVARQILLA GSGRRVLVLG GDVIARFYDV TADLRKLPPA QLVNYVLFGD
AAGAAVLSTE PGPGSAVVRA LFTRLVGLGR PPGATLEWFG PTDRDSTRPA ATEDYKAIEQ
HVPAMTGEVL EELLTATGWS PGEVDLLLPP QLSGRMTRLI TEKLALPRAG EVTVVDEAGN
CGNAIVFLQL ERALAKLGAG ERAVGVSIES SKWIKAGFAL QGGGGESR