| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3481 |
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| Symbol | |
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| ID | 5671852 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 4139422 |
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| End bp | 4140879 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641242369 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001507789 |
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| Protein GI | 158315281 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.208479 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0762295 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTAGGCA CGGACACGGC GGAGGACAGC CCCCCTCGGC TCGATTCCGC CCTGCTGATC
CTCATCGGGG TGATGGTGCT CGGCGGGATG ATGTCCTACC TGGACGCGAC CATCGTCAAC
GTCGGGATCA GCACGCTCGG CGCGGAGTTC GAGGCCTCGC TCGCCACGAT CGAGTGGGTG
ACCACCGGCT ACCTGCTGGC GGTCGCGCTC GCCATCCCGC TGGCCGGCTG GGCGATGGCG
CGCTTCGGCT CGCGGCGCAT GTGGCTGCTC GGCCTGTCGC TGTTCCTCGC CGGCTCGGCG
CTGTGCGCGG TGGCCTGGAA CGCGGAGAGC CTGATCGCCT TCCGGGTCCT GCAGGGGCTC
GGCGGCGGCA TGGTCGACCC GATCATGATG ACCGTGGTGG CCGGCGCCGC GGGGCCGGCC
CGCATGGGGC GGGTGATGGG CCTGATCTCG GTCCCGATCA CGCTCGGGCC GGTGCTCGGC
CCGATCGTCG GCGGTGTGCT GCTGGAGAAC TTCTCCTGGG AGTGGATGTT CCTGGTGAAC
ATCCCGTTCG CCCTGGCCGC GATCGTGCTC GCCATCGTGG TGCTGCCCGC CGACCCGCCG
CGGGACGGCA CACCGGTGCC CCTCGACGCC CTCGGCGTGG CCCTGCTGTG CCCCGGCTTC
GCCGCGGTCG TCTTCGCGCT CTCCCAGGCC GGGCGGGACG GCTTCGGCAG CGTCCAGGTC
GTGATCGGCC TGGTCCTCGG TGCCGCGCTG TTCGCCGGGT ACGCCGCGCA CGCCCTGCGC
ACCGCCGGCA CCCCGCTGCT CGACCTGCGG CTGTTCGCCA GCAAGGGCTT CAGCGCCAGC
GTGACCATCA TGTTCCTGGT CGGCGGCGGC CTGTTCGCGC TGCTGTTCCT GCTGCCGCTC
TACTACCAGC AGGTGCACGA CCACTCGGTG CTGGAGTCCG GCCTGCTGCT GGCCCCGCTG
GGCGTGGGCA CCATGATCGG CATGCCGCTG GCCGGCAACC TCGCCGACCG CATCGGCGCG
CGGCTGCTGG TGCCCACCGG CGCCCTGCTG GTCACCGCGG GCGCCCTGGT GTTCACCCAG
TCCGGGGCGG ACACCTCCCA GGCCCTGCTG ACCCCCGCCC AGCTCGTCAT CGGCTTCGGG
CTCGGGCTGG TCGGCGCGCC CACGATGGGC TCGGTGTACC GCACCGTCCC GCTGACGGCG
GTCGCCGGCG CGACCGGCGC GGTGTTCATC CTCAACCAGA TCGGCGCGTC GCTGGGCGTG
GCCGTCGTGG CCCTGATCCT GCAGGGCGGC GGGGCGCACG CCGCCCCGAC GGCCGACTCG
TTCGGGAACG CCTTCTGGTG GCCGGTCGCC GCCGGCCTCG TCGTGTTCAC GGCCGGCTTC
CTGCTGCCCG GCCGCCCGGC GCCGGCCCCC GAGGCGGCCC CGGCCGCCCC CGCGGAGCCG
GTGCCCAACT CGGTCTGA
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| Protein sequence | MVGTDTAEDS PPRLDSALLI LIGVMVLGGM MSYLDATIVN VGISTLGAEF EASLATIEWV
TTGYLLAVAL AIPLAGWAMA RFGSRRMWLL GLSLFLAGSA LCAVAWNAES LIAFRVLQGL
GGGMVDPIMM TVVAGAAGPA RMGRVMGLIS VPITLGPVLG PIVGGVLLEN FSWEWMFLVN
IPFALAAIVL AIVVLPADPP RDGTPVPLDA LGVALLCPGF AAVVFALSQA GRDGFGSVQV
VIGLVLGAAL FAGYAAHALR TAGTPLLDLR LFASKGFSAS VTIMFLVGGG LFALLFLLPL
YYQQVHDHSV LESGLLLAPL GVGTMIGMPL AGNLADRIGA RLLVPTGALL VTAGALVFTQ
SGADTSQALL TPAQLVIGFG LGLVGAPTMG SVYRTVPLTA VAGATGAVFI LNQIGASLGV
AVVALILQGG GAHAAPTADS FGNAFWWPVA AGLVVFTAGF LLPGRPAPAP EAAPAAPAEP
VPNSV
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