Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_3478 |
Symbol | |
ID | 5671849 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 4135581 |
End bp | 4136531 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641242366 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_001507786 |
Protein GI | 158315278 |
COG category | [E] Amino acid transport and metabolism [P] Inorganic ion transport and metabolism |
COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.112233 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.156031 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACCCGG CCATCCGTCT GGTGGCGGTC CGCCTGCTCG GCGCCGTCCT GGTCATCTGG GGCGCGGTCA CCGCCGCGTT CGTGGTGCTC CAGCTCATAC CCGGGGACCC GATCAACGCG ATCATCGGAA CGCACGCGCT GGTCGGGCCG GAACAGCGTG CTCAGCTCCG GGCCGAATAC GGCCTGGACG ACTCGCTGTT CGCGCAGTAC CTGGACCACA TGGGACGGCT GGCCACCGGT CGCCTCGGCG ACTCCTACCA GCTCCAGCAG CCGGTCTGGA CAGTGATCAC CGACCAGGCC GGCGCCACCG TCGAGCTCGC CGGATGGGCG ATGTTCTCCG CGGTGGTGCT CGCCGTGGCC GTGACCCTGC TGACCTCCGG GCGGGCCCGC TGGCCGCGCC GGATCAGCTC GCTGCTGGAG CTGGTCGTCG TCTCCACACC CCAGTTCTGG CTGGGGATCC TGCTGCTCAC CGTCTTCTCG TTCCATCTCG GCTGGTTCCC GGTGGCCGAC ACCGGGGACC CGCGTTCGCT GATCCTGCCG GTGGTGACCC TCGCGCTGCC GATCGCGGCG GTGCTCATCC AGGTGATGCG CGAGGGGCTG CTCTCCGCTC TGGAGGCGCC CTTCGTGCTG ACCGCGCGGG CCCGCGGCAG CGCCGAGTAC TCGGTGCGCG CGCGACACGC GCTGCGGCAC GCGAGCCTGC CCGCGCTGAC CCTGTCGGGC TGGTTCGTCG GCACGCTGCT CGGCGGGGCC GTGATCACGG AGAACGTCTT CGCCCGCTCC GGCATCGGGC GGGTGACCCT GCAGGCGGTC GCCAACCGGG ACTTTCCAGT CGTGCAGGGG GTGGTCGCGC TGTCGGCGGT GGTGTTCGTC GCCGTCAGCG CCCTGCTGGA ACTGCTGTAC GCGGTGGTCG ACCCGCGGCT GCGCAAGCGG ACGGGGGTGG CCGCGGCATG A
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Protein sequence | MHPAIRLVAV RLLGAVLVIW GAVTAAFVVL QLIPGDPINA IIGTHALVGP EQRAQLRAEY GLDDSLFAQY LDHMGRLATG RLGDSYQLQQ PVWTVITDQA GATVELAGWA MFSAVVLAVA VTLLTSGRAR WPRRISSLLE LVVVSTPQFW LGILLLTVFS FHLGWFPVAD TGDPRSLILP VVTLALPIAA VLIQVMREGL LSALEAPFVL TARARGSAEY SVRARHALRH ASLPALTLSG WFVGTLLGGA VITENVFARS GIGRVTLQAV ANRDFPVVQG VVALSAVVFV AVSALLELLY AVVDPRLRKR TGVAAA
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