| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3390 |
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| Symbol | |
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| ID | 5671761 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 4016135 |
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| End bp | 4016815 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641242278 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_001507698 |
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| Protein GI | 158315190 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0389848 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTATCC GAGTGCTCCT CGCCGACGAC CAGACCCTCC TACGGGCAAC CTTCCGGATT
CTGATCGACT CCTGCAGCGA CATGGAGGTC GTCGGTGAGG CCGCGGACGG GCACGAGGCC
GTCGCGGCGA CCCGGGAGCA CCGCCCGGAC GTCGTGGTCA TGGACATCCG CATGCCCGGC
ACCGACGGGC TCGCCGCCAC CGCCGCCATC TGCGGCGACG AGACGCTGGC GGCCACCCGT
GTCCTGATCC TCACGACCTT CGAGATCGAC GAGTACGTGG CCCAGGCGCT CCGCGTCGGC
GCGAGCGGCT TCCTCGGCAA GGACGTCGGA ACGGACGAGC TGCTCTCCGC CATCCGCACC
GTCGCCGGCG GCGACGCGCT TCTCTCGCCG GCGGCCACCC GTGTCCTCAT CAGCCGTTTC
CTCGCCACCC CGGAGCCCGC GGCCACCGCC ACGGTCAATC CCGTGGCGCT CGCCGCGCTC
ACCGCTCGCG AACGCGAGGT CATGGCGCTG GTGGCCGAAG GCTACTCGAA CCACGAAATC
GCCGACCGGC TTGTCATCAG CCCACTGACC GCCCGCACGC ACGTCCACCG GGCCATGGCG
AAGCTCAACG CCCGCGACCG GGCGCAGCTG GTCGTCATCG CGTACCAGTC CGGCCTGCTG
CAAACCGCTC GACCGGACTG A
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| Protein sequence | MTIRVLLADD QTLLRATFRI LIDSCSDMEV VGEAADGHEA VAATREHRPD VVVMDIRMPG
TDGLAATAAI CGDETLAATR VLILTTFEID EYVAQALRVG ASGFLGKDVG TDELLSAIRT
VAGGDALLSP AATRVLISRF LATPEPAATA TVNPVALAAL TAREREVMAL VAEGYSNHEI
ADRLVISPLT ARTHVHRAMA KLNARDRAQL VVIAYQSGLL QTARPD
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