| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3372 |
|---|
| Symbol | |
|---|
| ID | 5671743 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 3997075 |
|---|
| End bp | 3998184 |
|---|
| Gene Length | 1110 bp |
|---|
| Protein Length | 369 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 641242260 |
|---|
| Product | oxidoreductase FAD-binding subunit |
|---|
| Protein accession | YP_001507680 |
|---|
| Protein GI | 158315172 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGACCG ACACGCGGGC GGAACGCCAC CGGTACCACC CCCTGCGGGT GCTCCGGGTC
GTCCGGGAGA CCACCGAGGC CCGCTCGTTC GTGTTCGCTG TGCCGCCCGA GTTGGTCGAC
GTCTTCGCCT ACCAGGCGGG GCAGTTCGTC ACGCTCCGCG TCGTCCTCGG CGGTGCGGCC
CACCTGCGCA GCTACTCGAT GTCGTCCTCG CCGCCGCTGG ACGGCGAGCT GTGCGTGACG
GTGAAGCGAG TGCCCGGCGG GCTGATCTCG AACTGGCTGA ACGACACCGT CGACGCGGGC
GACGTCCTTG AGGTCGGTCC GCCCGGCGGC TCGTTCGTCC TCGACCGCGG CGGGCACGAC
ATCGTGGCAT TCGCCGCCGG CAGCGGCATC ACCCCGATTC TCTCGATCAT CAGGACGGCG
CTGGCCACCT CCGACCGGCG CGTCCGCGTG CTCTACGCCA ACCGCGACCG GACCGCCGCG
ATCTTCGGCG ACGAACTGGA CGCGCTGGCC TCGCAGTACC CGGGCCGGCT CGCCGTCGAG
CACCACGAGG ACCTCGTCCG CGGGTTCGTC GACCGCGGCG ATGTCGCCCG TGTCGTCGAC
GCCGGCGGTG GCGGCAATGC CGGTGGCGGT GGTGCCGGCG GTGGCGGTGC CGGCGGTGGC
GGTGCCAGCG GTGGCGGTGC CGGCCATGTC GGCGGCGCCG CCTACTACGT CTGCGGGCCC
GAAGGTTTCC TGGACGTCGT CGAGGCCGGG CTCGTTGATC TGGGCGCCGA CCGGGCACGG
GTGCACGTCG AACGGTTCAC GCCGGTGGCG GAGCCACTGC CCGCCGGTCC TCCGGACGAC
ATCACGGTGA CCATCAGGCT CGGCGGGCGG ACGGTGACGG CCAGCCACCG CCATGGCAGC
ACGCTCCTGC AGACGGCACG GTTCGCGGGT CTGCGCGCCC CGTCGTCGTG CGAGACCGGC
AGCTGCGCCA CCTGCATGGC CCGTCTCGCG CAGGGGCGGG CCGAGATGCG CGTCAACGAC
GCACTGACTC CCGACGAGGT CGCCGAGGGA TGGGTGCTCA CGTGCCAGGC CGTACCGGTG
ACCCCGGTCG TCGAAGTGGT CTACGAATGA
|
|---|
| Protein sequence | MPTDTRAERH RYHPLRVLRV VRETTEARSF VFAVPPELVD VFAYQAGQFV TLRVVLGGAA
HLRSYSMSSS PPLDGELCVT VKRVPGGLIS NWLNDTVDAG DVLEVGPPGG SFVLDRGGHD
IVAFAAGSGI TPILSIIRTA LATSDRRVRV LYANRDRTAA IFGDELDALA SQYPGRLAVE
HHEDLVRGFV DRGDVARVVD AGGGGNAGGG GAGGGGAGGG GASGGGAGHV GGAAYYVCGP
EGFLDVVEAG LVDLGADRAR VHVERFTPVA EPLPAGPPDD ITVTIRLGGR TVTASHRHGS
TLLQTARFAG LRAPSSCETG SCATCMARLA QGRAEMRVND ALTPDEVAEG WVLTCQAVPV
TPVVEVVYE
|
|---|
| |