Gene Franean1_3359 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3359 
Symbol 
ID5671730 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3977712 
End bp3984374 
Gene Length6663 bp 
Protein Length2220 aa 
Translation table11 
GC content75% 
IMG OID641242247 
ProductAcyl transferase 
Protein accessionYP_001507667 
Protein GI158315159 
COG category[C] Energy production and conversion
[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG0604] NADPH:quinone reductase and related Zn-dependent oxidoreductases
[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
[COG3321] Polyketide synthase modules and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTAT TTGCCGACGC GTGGTCGAAT ACCACGGCCG CCGACAAGGA ATCCTGCGTC 
AAACGGGATG ACATAGCGAT CGTGGGGATG GGGTGCCGCC TTCCGGGCGG CGTGGATTCG
CCGGCCGCAC TCTGGCGGCT CCTGGTGGAG GAACGGGACG CGGTCGGCGA TCCACCTGCG
GGCAGGTGGG AGGCCGACGC GTTCGTCGAC CCTGTCCTGA CCGCGGCGGG CCGCTCCGTT
CCCCGCCAGG GCGGTTACCT CGAGGACGTG TCCGGTTTCG ACGCCGACTT CTTCGGCGTC
TCACATCGGG AGGCCGCCGT CCTCGACCCG CAGCACCGGC TGCTGCTCGA GGTCGCCTGG
GAGGCTCTGG ACAACGCCGG TCTCCCTGCC GACCAGCTCG AGGCCACGCC GACGGGCGTG
TTCACCGGGC TCAGCTACAC CGACTACATG GATCGGCTGG CCGGGCACCC GGACGAGCTC
GAGGGCTCGG TCCTCACCAA CGGGATCTGC GTGGCGGGCG GCCGGATCTC CTACCTGCTC
GGCCTGCGCG GGCCCAGCAT GTCGGTGGAC ACCGCCTGCT CGTCGTCGCT GGTCGCCGTG
CATCTCGCCT GCCAGAGCCT GCGGTCCGGG GAATGCACGG TGGCGCTCGC GGGCGGGGTG
ACTCTCATGC TGTGGCCCCG GGTGACCAAG TCGTTCGTCC GGATGGGCAT GCTCTCGCCG
ACGAGCCGTT GCCACACCTT CGACGCCGCT GCGGACGGGT TCGTCCGCGG CGAAGGTTGC
GGTGTCGTCG TCCTGAAGCG GCTTGCCGAC GCCAACCGCG ACGGTGACCG GGTCCTGGCC
GTGATCCGCG GGTCGGCGGT GAACCAGGAC GGCCGCACCG ACGGGCTGAC CGTTCCCTCC
GCGCAGGCCC AGTACGAGGT GGCGGCCGCC GCGCTGCGGC GCGCCGAGGT CGACCCGGCC
GAGGTCGGGC TGGTGGAGGC GCACGGCACC GGCACGAAGG TCGGCGACCC CGTCGAGTTC
GCCGCACTGA GTCGCGCCTA CGGCACCGAT GGCGCGCGGT GCGCGCTCGG TTCGGTGAAG
ACGAACCTGG GGCACCTGGA GCCCGCGGCG GGTGTCGCCG GCCTGATCAA GGCGGTGCTG
TGCCTGCGGC ACGGCCAGAT ACCGGCGAAC CTGCACTTCA CCCGGTGGAA CCCGGCGATC
GACGCTGACG GGTCGCGGTT CTTCGTGCCC ACCGGGCTGA CCGACTGGCC TGGCGCCGCG
CCGTCGCGGC TGGCCGCCGT TTCCTCGTTC GGGTTCTCCG GGACGAACGC GCACCTGGTG
CTCGAACAGG CCACGGCCGG GGTGAGCCGT CCCCCGATTC CAGCCGCGTG TACTCCGGCA
CGGGCCGAAC ACGAGTCCGG CCGGGTAGAC GGCCAGTCGT CGGCCGTCCG GGCCCGCGGG
GCCCGCGGGC CGGAGGTGGT CCTGGTGCCC GCCGGGTCGC CCGCGGTGCT GCCCGCCGCC
GCGGCGCGGC TCGCGGACTG GCTGGAGTGC GAGCCCGGAG ATGACGCGGC CACCGGAGGC
GATCCTGCGG CCGGTGCCGG CGCGCCTGCC CGGGGTGCGG GTCTGCGGGA CGTCGCCTAC
ACCTTGGCGC GCAGGCGGTC CCCCGGGAAC GGCCGGCTGG CTGTCGTGGC GGCCTCGCGG
AAGGATCTGA TCCGGGACCT GCGCGCCTAT GCGGACGGCC GGTTGGTCCC CAACGTCGTC
TCCGGGGCCG CCGCCCGGGG CGTGCGGCGC GGCGCGGTGT GGGTGTTCTC CGGCCAGGGC
TCGCAGTGGG CGGGCATGGG GGCCGACCTG CTGGACGCGG AGCCGGTGTT CTCGGCCGCG
GTGGCCGAGG TCGACCCTCT CATCGCCGCC GAGGCCGGTT TCTCGGTGCT GGAGGTGCTG
CGCCGCCGGG AGGCGGTCAC CGGGTGCGAC CGGGTGCAGC CCCTGCTCTT CGCGGTACAG
ATCGGGCTGG CCGCGCTGTG GCGCGCCCAC GGTGTCGAGC CCGCGGCGGT CATCGGTCAC
TCGATGGGGG AGACGGCCGC GGCTGTCGTC GCCGGCGCGC TGACCCTGGC CGACGGTGTC
CGGGTGATCT GCCGCCGTTC CCGTCTGCTC ACCCGGGTGG CCGGCCTCGG CGCGATGGCC
ACCGTCGGCC TCGACCGGTA CGCGACCGAG GCGGAGCTCG CCGCGGCCGG CGCGAGCGGC
GAGGTTGCTG TCGCGGTCCT GGCTGCTCCC GGCTCCACCG TCGTCTCCGG CGCCGCGGAC
AGGATCAGGG ATCTAGTCAC CGACTGGACC GCGCGTGGCC TGGCGGCCCA TCAGATCGCG
GTGGACGTCG CCTCGCACTC ACCCCAGGTC GACCCGCTGC TCGCCGACCT CACCGCGGAA
CTGGCCGAAC TGCGCCCCCG GCCGGCCGAG GTCCGCTTCT ACTCGACCGC GGCGGAGGAC
CCGCGGGGGA AGCACGAATT CGACGCCGCC TACTGGTGCG CGAACCTGCG CCGTACCGTG
CGCTTCAGCG ACGCCGTGAC CGCGGCCGCG GCCGACGGGC ACCGGGTCTT CGTGGAGATC
TCCCCGCATC CGGTCGTCAC CCGGTCGGTC ACCGACATCC TTGCCGCGGC CGGGCGGGAG
CCGGTGGTAC TGCCGACGCT GCGTCGCGAC GAGGACGGCG TGGCCGCCTT CCGTACCAGT
CTCGCGACCG CGCACTGCGC GGGAGTTCCG GTGGACTGGT CCGTGCTCTA CCCGACCGGC
GACCTCGTGG ACCTGCCGAC GATCTCCTTC GACCGCCGGC GCCACTGGGC GGACCGCGAG
GCTCCGGCGG CGGCTCCGTC GGCCGCCGGT GGCCGTGGCG GGCCGGCGGC GCTCGACGGC
CGGGAGGCCG TGGACCGGTC GCTGCCCGGG GAGCACCTGG TGGTGCCCGG CGAGCATCTG
CGCCACGTCT GGCGGGCCGA CACCGGGACC GCGGTCATCC CCTGGCTGGC TGACCACCTG
GTGCACGACC GCGTGGTACT GCCCGGCGCC GCCTACTGCT CGCTGGCGGT CACCGCCGCC
GCCGAGGTGT TCGAGGTGGG GCCGGCCCGG GTGCGGGTCA CCGGCATCGC CTTCGAGGAG
GTGCTCTACC TGGGCGAGCA CACCGAGATC ACGATGACGG CCGCCGTCAC CGGCCCCGGT
GAGGCGGAGT GCGAGATCCA CGCGCGGAAC GGTGACGGCG CCTGGACCCG TCACATGGCC
GCCACCGTCA CGTGCGCCGA CGACGACCCG CCGCCGGACA CCGCCGCCGG CGGCCTGGCG
GAACTCGCCG GTGCCCATCC CCGACGGGTC GGCCCCGCGC GCCTGTACGA GGCCATGCGG
GAGCGGGGCA TTCACCACGG CCCGGCGTTC ACGGCGCTGT CCGATCTGCA CCTGTCCGAG
GACGGTGGGA GCGCCTGGGC CGGCATCGGG ATCCCGACCG AGGCGTACGC CACCGAGGAC
GCGTTGGCCG TGCACCCCGT GCTGCTGGAC GCCGCCGCCC AGACGTTGCT GACCTGCATG
CCCGGCCTGG TCGCCGGGTC GGCGTCCGGT GGTCTGGTGC TGCCTGCCGG GACGGACAGC
ATCCGGATCC ACGGCGATCC GGCGACCGTG CGCTACTGCC ACGCCCGCCT GGACGCCACC
GGGACGGGCA CTCTCACCGG CGAGGTCCGC CTGCTGGACG AGGCCGGCGC GCTCGTCGTC
GCCATCGACG GCATGCGACT CGTCCACCAG GACGGCCAGC GTCGCCTCGA CGGTTCCGGG
GACTGGATCT ACGGGATCGA CTGGGAGCCG TCACCCCGCC CGGAGCCGGC CCAGCCGCGG
GCCGCCGGCC GATGGTTGCT GCTCGGCGAC GCGAGCGGTT CGGTGGGCGC GCTCGGCACG
GCCCTGTCCG CCGCCGGGGC GGACGTCGAC GTCCAGCCGC TGCCCGGTCC CGATGACGCC
CGGCGGGCCT GGGCGGCGTC CCTCACCGGG GACGACGGGG GAGCCGTCGG CCGGCGGGTG
GTCGTCGTCC TCGACGGCGC GACCGCGCAG CCAGTGCCTG GTGCCCAGGT CGACCCGTCG
GCCCTGGCCG GCCCGCCGTT CCCGCCGTTC CCGGCAGATC CGGCGCGGGC GCAGCAGCAG
ACCATGACGG TGCTGGGCGT CGCCGCGGCG TTGGCCGAGC TGCCCGGAGT GCCGCCCGGC
CTGACCGTGG TGACCCGAGG TGCACACGCC CTGGGCGGGA ACGCGGTCCC TGATCTTGAT
CACGGCGGGA TCCGCGGACT GCTCCGGGTG CTCACGCTGG AACACCCCGA GCTGCGCGCC
GCCCACATCG ACGCCGATCC CGGCCCGGAT GTGACGGCCG TCGTCGCCGA GCTGCTCGGC
GATGTCCACG GCGCCCACTC CGGCCCTGCC GATGACGAGG TCGCGCTGCG GGCCGGTGTC
CGTTTCGTCG CCCGGTTGAC CCCCGCGCCG GTGACCGCCG CCGAGCGTGG TGCCGCCGGG
CGGCGTACGG TCCGGTACGG CCACGATCGG TTCGCCCTGC AGCCGCCCGG CAACGGGAAT
CTCGACGACC TGCGGCTCGT CGCCACTGAC CGGCGCCCAC CCGGGCACGG CGAGGTCGAG
GTCCGAGTCC AGGCCGCCGG CCTGAACTTC CGGGACGTCC TCATCTGCCT GGGGGCATTG
CCGCAGACAC CGATCGGCTT CGAGTGCGCC GGCGTGGTCA CGGCGGTCGG GCCGGGCGTC
ACCGACCGCC GGCCCGGCGA CGCGGTACTC GCGGTGAACT TCACCGACGG CGGCGCGTTC
GGCTCGTTCC TGACCATCGA CGCCGACCTG ACCATGCCTG TACCCGGCGG ACTCGACCCG
GCCACCGCCG CGGGCATCCC CACCGGCTTC CTCACCGCCT GGTACGCGCT GCGGGACGTC
GCCCAGCTGC GGGCTGGCGA GCGGGTGCTG ATCCACTCCG GCACCGGCGG GACAGGTCTC
GCCGCGATCG CCGTCGCGCG GCTGCTGGGA GCCGAGGTCC TCGCCACCGC CGGCACCCCG
GAGAAACGCG CCTATCTGCG CGGCATGGGC ATCACCCACG TCATGGACTC GCGTTCGGTC
GACTTCAGCG CGCAGACCCT GGCCGCGACC GGCGGGCAGG GCGTCGACGT CGTGCTCAAC
TCGCTGTCGG GGCCGGCGAT CCGCGCCGGA ATGGAGTGCC TGCGGCCCTT CGGACGTTTC
GTCGAGCTCG GGCTGCGCGA CATCCTCGCG GACTCGGCGC TCGGGCTGGC GCCGTTCCGT
AACAGCATCA CCTTCGCCGG GGTGAACCTG ATCGAGCTCT ACCGGCACCA GCCGGAGCGG
GTCGCCCGGA TGCTGCGGGA GCTGACGGCG GCGCTCGCCG CCGGCGAGCT CGCGCCGCTG
CCTGTCACGA CCTACCCGCT CGAGGCCGCC ACGGACGCGT TTCGGCTGAT GGCCGGTGCC
GCGCACATCG GCAAGGTCGT GCTCGAGGTC CCCGGCGACG CGGTGACCGA GGCCGTGCTG
CCCGACGGGC CGCCGTCGCC GGTCGGCGTG GACGGCTCGT ACATCGTCAC CGGTGGCCTG
CGCGGCGTCG GCCTGGAGAC CGCCGCCTGG CTGGCGGAGA AGGGCGCGGC CAGAGTGGTG
CTCAACGGGC GGTCCGAGCC CGCCGAGGAG GTCCGGGAGC GCATCGCGAA ACTGGTCGCG
GGCGGTACGG ACGTCCAGGT GGTGCTCGGC GACGTCGCCG AGCCCGGTGT GGCGGAGCGC
CTCGTCGCCG CCGCCACCGC CGGGGGCGGC CGGCTGCGTG GCGCCGTTCA CGCAGCGATG
GTTCTGGATG ATGCCGCCCT CACCACGATC ACCGCCGACC AGGTGCGTCG AGTGTGGCAT
CCGAAGACGT TCGGCGCGTG GCGGCTGCAC GAGGCGACGG CCGGGGCGGA CCTCGACTGG
TTCGTGCTCT ACTCGTCGAT GGCCTCCCTG CTCGGTAACC CCGGGCAGGG CGCGTACGCC
GCCGCGAACT CCTGGCTCGA CGGCTTCGCC GACTGGCGGT GCGCTCAGGG GCTGGCGACC
ACCGTCGTCA ACTGGGGGCC GTGGGCCGAG GTGGGCGCCG CCACCGACTT CGCCGAGCGT
GGGTACGCGA TGATCCCGGT GCGGGCCGGG CTCGCCGCGC TGGAGACGCT GCTCGTCCAC
GGGCGGCGGC GCGCGGGTGT GCTCCCCGGC GAGCCGGGCT CCTGGATTCC GGCCGCGGGC
CGCTCCTCGT CGCTGTTCGC CCGGTTCGTC GACGACGAGC ACGCCTCGTC GGCCGCCGCC
GGGGGCGCCG TGGCCGTTCC GGGCGCTGGG GGTGCCGCCG CGGCAGTCGC GGACGGGCCG
GGCGCTGTCC TGGCCGGGAT ACGCGCGGTG GCTCCCGGCC TCCCGCGGCG CACGGCCTTC
GAGGCGTACC TGACCGAGCA CCTCAGGGCC GTCCTCCGGC TGGGCCAGTC CGTGCTCGAC
CCGGACATCC CGCTACGGTC CCTCGGCTTC GACTCGCTGC TGGCTCTCGA ACTGCGGTCC
CGCCTGGAAC CGGGGCTCGG GATCTCCCTG CCGGGGAACT TCATCTGGAA GTACGACACC
GTCGCGACTC TCGCCGCCGG CCTCGCCGAC CACACGAAGC TCCCGCTCGA CGGCGGCGAA
TAA
 
Protein sequence
MSVFADAWSN TTAADKESCV KRDDIAIVGM GCRLPGGVDS PAALWRLLVE ERDAVGDPPA 
GRWEADAFVD PVLTAAGRSV PRQGGYLEDV SGFDADFFGV SHREAAVLDP QHRLLLEVAW
EALDNAGLPA DQLEATPTGV FTGLSYTDYM DRLAGHPDEL EGSVLTNGIC VAGGRISYLL
GLRGPSMSVD TACSSSLVAV HLACQSLRSG ECTVALAGGV TLMLWPRVTK SFVRMGMLSP
TSRCHTFDAA ADGFVRGEGC GVVVLKRLAD ANRDGDRVLA VIRGSAVNQD GRTDGLTVPS
AQAQYEVAAA ALRRAEVDPA EVGLVEAHGT GTKVGDPVEF AALSRAYGTD GARCALGSVK
TNLGHLEPAA GVAGLIKAVL CLRHGQIPAN LHFTRWNPAI DADGSRFFVP TGLTDWPGAA
PSRLAAVSSF GFSGTNAHLV LEQATAGVSR PPIPAACTPA RAEHESGRVD GQSSAVRARG
ARGPEVVLVP AGSPAVLPAA AARLADWLEC EPGDDAATGG DPAAGAGAPA RGAGLRDVAY
TLARRRSPGN GRLAVVAASR KDLIRDLRAY ADGRLVPNVV SGAAARGVRR GAVWVFSGQG
SQWAGMGADL LDAEPVFSAA VAEVDPLIAA EAGFSVLEVL RRREAVTGCD RVQPLLFAVQ
IGLAALWRAH GVEPAAVIGH SMGETAAAVV AGALTLADGV RVICRRSRLL TRVAGLGAMA
TVGLDRYATE AELAAAGASG EVAVAVLAAP GSTVVSGAAD RIRDLVTDWT ARGLAAHQIA
VDVASHSPQV DPLLADLTAE LAELRPRPAE VRFYSTAAED PRGKHEFDAA YWCANLRRTV
RFSDAVTAAA ADGHRVFVEI SPHPVVTRSV TDILAAAGRE PVVLPTLRRD EDGVAAFRTS
LATAHCAGVP VDWSVLYPTG DLVDLPTISF DRRRHWADRE APAAAPSAAG GRGGPAALDG
REAVDRSLPG EHLVVPGEHL RHVWRADTGT AVIPWLADHL VHDRVVLPGA AYCSLAVTAA
AEVFEVGPAR VRVTGIAFEE VLYLGEHTEI TMTAAVTGPG EAECEIHARN GDGAWTRHMA
ATVTCADDDP PPDTAAGGLA ELAGAHPRRV GPARLYEAMR ERGIHHGPAF TALSDLHLSE
DGGSAWAGIG IPTEAYATED ALAVHPVLLD AAAQTLLTCM PGLVAGSASG GLVLPAGTDS
IRIHGDPATV RYCHARLDAT GTGTLTGEVR LLDEAGALVV AIDGMRLVHQ DGQRRLDGSG
DWIYGIDWEP SPRPEPAQPR AAGRWLLLGD ASGSVGALGT ALSAAGADVD VQPLPGPDDA
RRAWAASLTG DDGGAVGRRV VVVLDGATAQ PVPGAQVDPS ALAGPPFPPF PADPARAQQQ
TMTVLGVAAA LAELPGVPPG LTVVTRGAHA LGGNAVPDLD HGGIRGLLRV LTLEHPELRA
AHIDADPGPD VTAVVAELLG DVHGAHSGPA DDEVALRAGV RFVARLTPAP VTAAERGAAG
RRTVRYGHDR FALQPPGNGN LDDLRLVATD RRPPGHGEVE VRVQAAGLNF RDVLICLGAL
PQTPIGFECA GVVTAVGPGV TDRRPGDAVL AVNFTDGGAF GSFLTIDADL TMPVPGGLDP
ATAAGIPTGF LTAWYALRDV AQLRAGERVL IHSGTGGTGL AAIAVARLLG AEVLATAGTP
EKRAYLRGMG ITHVMDSRSV DFSAQTLAAT GGQGVDVVLN SLSGPAIRAG MECLRPFGRF
VELGLRDILA DSALGLAPFR NSITFAGVNL IELYRHQPER VARMLRELTA ALAAGELAPL
PVTTYPLEAA TDAFRLMAGA AHIGKVVLEV PGDAVTEAVL PDGPPSPVGV DGSYIVTGGL
RGVGLETAAW LAEKGAARVV LNGRSEPAEE VRERIAKLVA GGTDVQVVLG DVAEPGVAER
LVAAATAGGG RLRGAVHAAM VLDDAALTTI TADQVRRVWH PKTFGAWRLH EATAGADLDW
FVLYSSMASL LGNPGQGAYA AANSWLDGFA DWRCAQGLAT TVVNWGPWAE VGAATDFAER
GYAMIPVRAG LAALETLLVH GRRRAGVLPG EPGSWIPAAG RSSSLFARFV DDEHASSAAA
GGAVAVPGAG GAAAAVADGP GAVLAGIRAV APGLPRRTAF EAYLTEHLRA VLRLGQSVLD
PDIPLRSLGF DSLLALELRS RLEPGLGISL PGNFIWKYDT VATLAAGLAD HTKLPLDGGE