| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3343 |
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| Symbol | |
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| ID | 5671715 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 3956184 |
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| End bp | 3957788 |
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| Gene Length | 1605 bp |
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| Protein Length | 534 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641242232 |
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| Product | EmrB/QacA family drug resistance transporter |
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| Protein accession | YP_001507652 |
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| Protein GI | 158315144 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.953855 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGATG ACCAACCACG ATCCGACTCC CGGAGGAGAT CCCCTCGATG CCCGACGCAG
TCGATGTCTG ACCCCACGCT GGCCGCAGTT ACCGGCGGAG CCGACCGGCG CCGGTGGATC
GCCCTCGTGG TCGTGTGCCT GGCCATGCTG ATGAACGCGC TCGACTCGTC GATCGTCAAC
GTGGCGTTGC CGTCGATCCA GGGCGACCTG CACTTCAGCC AGTCCAACCT CACCTGGGTC
GTCGACGCCT ACCTGATCGC CTTCGGCAGT TTCCTGCTGC TCGCCGGGCG CCTCGGCGAC
CTGGTCGGCC GCAAGCGGGT GTTCCTCACC GGGGTCGCGC TGTTCACCGC CGCCTCGGCG
CTGTGCGCCG TCTCCCCCAA CCAGGGCACG CTGATCGTGG CCCGCTTCGC CCAGGGGCTC
GGCGGCGCCG TCTCCTCGTC GGTGATCATC GCGATCATCG TCACCGAGTT CCCGAACGCG
ACGGAGCGGG CCCGGGCGAT GAGCGCCTAC ATGCTCGTCG CCGTCGGGGG CGGGTCACTG
GGGCTCGTGG CCGGCGGAGT GCTCACCCAG GCCGTGAGCT GGCACTGGAT CTTCCTCATC
AACGTCCCGA TCGGGGTCGC GACCTTCGTC CTCGGGGTCG TCCTGATCGA GGAGAACGTC
GGTCTCGGGG TGGGCCGAGG AGTGGACGTC ACCGGTTCCC TGCTGGTCAC CGCGGCGCTG
CTGCTCGGCA TCTACGCGAT CGTCACGGCG GCCACCCACG GCTGGGCCTC GGCCCAGACA
CTCGGGTACG GGGCCGTCGG GGTTGTGCTC CTGGCCGCGT TCTTCCTGGT CGAGGCCCGG
CGGAGCAATC CGATCATGCC GTTGCGGATC CTGCGGGTGC GCAGCCTGGT CGGCTCCAGC
GTGGTGCGCG GATGCCTGTT CATCGCGATG TACGCCGTCT TCTTCTTCGG TGCGCTCTAC
CTCGAGCAGG TCCGCGACTA CAGTCCGCTG CGCACCGGGC TCGCGTTCCT GCCGATGTCC
CTCGTCGTCG CGGCCCTGTC GATGGGCATC GTCAGCCGGC TGCTCATCCG CTTCGGAGCG
ATGAACGTGC TCGTCCCCGG ACTGGTCGCG GTGATCGTCG GCCTGTTCCT GCTGACCCGG
GTGGACGAGC ACACCAGCTA CGCCGCCGGC CTGCTCCCGG GGCTGCTGAT CCTCGGTCTC
GGCATGGGCG CCGCGATGGT CCCGCTGCTG TCGATCGCCA TGGCGGACGT CCCCCCGGCC
GACGCCGGGC TGGCCTCGGG AATCGTCAAC GTCTCGATCT GGCTCAGCTC CTCGGTCGGC
CTCGCCGTCC TCTCCAGCCT CGCCGCCAGC CGCACGAAAA CCCTCACCGC CCACGGGCAC
TCCGCCGTCG CCGCCCTGGT CAGCGGCTAT CACCTGGCCT TCCTGATCGG TACCGGCTGC
GCCCTGCTCG GGCTCGTCAC GACGCTCGTC GTCCTGCGCG CTCCGGCCCG GGCGGCGTTC
GCGGCGACGC GGGCGGCAGC GGCGGCGACA GCCGAATCCG CGAAGCTGCC CACCCCCCGC
GAGCATCCTG AGCCCCGGGT GGAGGCGGTC CCCCACGAGT CCTGA
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| Protein sequence | MPDDQPRSDS RRRSPRCPTQ SMSDPTLAAV TGGADRRRWI ALVVVCLAML MNALDSSIVN
VALPSIQGDL HFSQSNLTWV VDAYLIAFGS FLLLAGRLGD LVGRKRVFLT GVALFTAASA
LCAVSPNQGT LIVARFAQGL GGAVSSSVII AIIVTEFPNA TERARAMSAY MLVAVGGGSL
GLVAGGVLTQ AVSWHWIFLI NVPIGVATFV LGVVLIEENV GLGVGRGVDV TGSLLVTAAL
LLGIYAIVTA ATHGWASAQT LGYGAVGVVL LAAFFLVEAR RSNPIMPLRI LRVRSLVGSS
VVRGCLFIAM YAVFFFGALY LEQVRDYSPL RTGLAFLPMS LVVAALSMGI VSRLLIRFGA
MNVLVPGLVA VIVGLFLLTR VDEHTSYAAG LLPGLLILGL GMGAAMVPLL SIAMADVPPA
DAGLASGIVN VSIWLSSSVG LAVLSSLAAS RTKTLTAHGH SAVAALVSGY HLAFLIGTGC
ALLGLVTTLV VLRAPARAAF AATRAAAAAT AESAKLPTPR EHPEPRVEAV PHES
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