| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3305 |
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| Symbol | |
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| ID | 5671677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 3917023 |
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| End bp | 3917829 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641242194 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001507614 |
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| Protein GI | 158315106 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.552464 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCCGGGA GGCGCGGCGC GCTTCGTCGC CGTCGCGCCG TCGCGGGCAG CGGCCGGTTC
CAGATGAAGC GGGTCGCCGT GGTGACGGGC GGTGCGTCGG GGATGGGGCT TTCCATCTGC
CGGCATCTCG CCGACCGGGG TCACAGAGTC GCCGTGGTCG ATCGCAACGG TTCGGCCGCG
CGGCAGGCCG CGAAGGAGCT GGCCGCGGAC GGGGCGGAGG CGTTGGCGTG CGAAGTCGAC
GTCACCAGCC GTCCGGACGT GGAGAACGCG CTGAGCCAGG TCCGCGAGGA GTTCGGCCCG
GTGGAGATAC TGGTCACGAG TGCGGGGCTC GCGGCGTTCG AGCCTTTTGT TGAAATCACA
CTCGAGTCCT GGAACAGGGT GATCGAGGTG AATCTTACCG GGACTTTCCA CTGCGTTCAG
GCTGTGATCC CTGATATGGT CGCGGCGCGG TGGGGGCGTA TCGTGACCCT CTCGTCGTCA
AGCGCTCAGC GGGGTTCGCC CCGCATGGTC CACTACGCCG CGTCCAAGGG TGCCGTCATC
GCCATGACGA AGGCCCTCGC GCGGGAGTAC GCGTCGTTCG GGATCACGGT GAACAGCATC
CCGCCGTCGA GTATCGACAC ACCGATGTCC CGCAGCGCCC AGGCGGCCGG CGACCTGCCG
GACAACGAGG TCCTGGTGAA CGCGATTCCG GTGGGTCGGC TGGGGACGGG TGATGACATA
GCCGCCGCCT GCGCCTTTCT CTGCTCCGAT GACGCCGGTT TCATCACCGG CCAGGTCCTC
GGGGTGAACG GCGGGAGTGT CATGTGA
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| Protein sequence | MPGRRGALRR RRAVAGSGRF QMKRVAVVTG GASGMGLSIC RHLADRGHRV AVVDRNGSAA
RQAAKELAAD GAEALACEVD VTSRPDVENA LSQVREEFGP VEILVTSAGL AAFEPFVEIT
LESWNRVIEV NLTGTFHCVQ AVIPDMVAAR WGRIVTLSSS SAQRGSPRMV HYAASKGAVI
AMTKALAREY ASFGITVNSI PPSSIDTPMS RSAQAAGDLP DNEVLVNAIP VGRLGTGDDI
AAACAFLCSD DAGFITGQVL GVNGGSVM
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