| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3251 |
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| Symbol | |
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| ID | 5671625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | - |
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| Start bp | 3846183 |
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| End bp | 3848210 |
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| Gene Length | 2028 bp |
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| Protein Length | 675 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641242143 |
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| Product | ABC transporter related |
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| Protein accession | YP_001507563 |
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| Protein GI | 158315055 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.135546 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAGCGCG ACGCGACCAC CCGTGCCTCC GGCCCGGCGG CGGCGTACCG CGCCCTCGGC
CGGTCCGACG GAAACCCCGG TACCGGTGCC GGTACCACGC GCCGCGTCTG GCGCGCGATC
TCCAGCCAGC GGGCCCTCCT GCTCGGCACC GGAGGCCTCG GCATCGTCAG CGTGGTGTTC
ACCGCGGCGG GGCCGTGGCT GCTGGGCAGA GCCACCGACC TGGTGCTGGC AGGGTCGCTG
GGCCAGGCGC TCGACCCCGG GAAGACCCGG AAGGACGCGC TCGCCGACCT GCGCGCCGAC
GGCCACGGCA CGATCGCGCA GGTGCTCGGC GCGATCGACG TCGTTCCCGG TCAGGGCATC
GACTTCGGCG CGGTAGGCCG GGTGCTGTTG TACGCGGCGC TGGTCTACCT GGCCGCGGGG
GCGTGCTCGG TGGCACAGTC CTGGACGGCC AATCTCGCCG TGCAGCGCGT CGTTCGGCAC
CTGCGTGCCG ACGTCGAGGC GAAGCTGTCC CGGGTGCCCG TCGCCTACTT CGACGGCCGC
CGCCGCGGCG AGATCCTCAG CCGGGTCACC AACGACCTCG ACAACCTCGG CCAGAGTCTG
CAGCAGGTGC TCGCGCAGTT CGTGATCCCG CTGTTCAGCA TCGTGGGAAT GCTGGCCGTG
ATGTTCTGGA TCTCCTGGAT ACTGGCCCTG ATCGCGTTGG TCTCCGCGCC GCTGTCGCTG
CTGGTCGTCA TCGGGATCGG GAAGCGGGCC CAGCCGTACT TCCTGGAGCA GTGGCGGCAG
ACCGGGCGGC TCAACGGCCA TGTCGAGGAG ATGTTCACCG GGCACGGGCT GGTCAAGGCG
TTCGGGCGCG AGCAGGAGGC GATGGAGGTC TTCGTCGCGG GGAACGAGGA ACTGACCGAG
GCGACCCGCC GCGCGCAGTC GGTCTCGAGC GCCATCCAGC CGGCGATGAT GTTCATCAGC
AACCTGAACT ACGTCCTGGT CGCGGTGGTC GGCGGGGTAC GGGTGGCCGC CGGGGCGCTG
ACGGTCGGCG ACATCCAGGC GTTCATCCAG TACTCCCGCC AGTACAGCCA GCCCCTGGTG
TACCTGGCGA GCATGGCCGG GATGGTGCAG TCCGGCCTCG CCTCCGCCGA GCGGGTCTTC
GAGATCCTCG ACGCCCCCGA GCAGTCGCCG GATCCCGCCG AGGTGGAGCC GCTCGCCGGG
GACCCGCGCG CGGTCGGCCT GCCGCCGGTG GCCGCCGGCC GGGTGGCGTT CGAGGACGTC
TCCTTCCGCT ACAACCGCGA CAGGCCGCTC ATCGAGAACC TGTCGCTCGT CGCGGAGCCA
GGGCACACGG TGGCCATCGT CGGCCCGACC GGGGCGGGCA AGACCACGCT GGTCAACCTG
CTGATGCGCT TCTACGAGAT CGACGGGGGG CGCATCACAC TCGGTGGCGT CGACATCGCC
ACGATGCCGC GGGCGCGGCT GCGGGCCCGC GTCGGGATGG TGCTCCAGGA CACCTGGCTG
TTCGGCGGGA CGATAGCCGA GAACATCGCC TACGCCAGGC CGGGCGCGAC ACGCGAGGAC
GTCGTCGCGG CGGCGGTGGC CGCCCACGCC GACCGGTTCG TCCGCACCCT TCCCGACGGC
TACGACACCG TCGTCGACGA CGAGGACTCC GGCATCAGCG CCGGCGAGAA GCAGCTCCTC
ACCATCGCCC GGGCCTTCCT GGCCGAACCC GCGGTCCTCG TGCTCGACGA GGCGACCAGC
TCCGTCGACA CCCGCACCGA GATGATCATC CAGGCGGCCA TGGCCCGCCT CCGGAAGGGA
CGCACCGCCT TCGTCATCGC GCATCGGCTC TCCACCATCC GCGACGCCGA CACGATCGTC
GTCATGGAGG ACGGCATGCT CGTCGAGCAG GGCACGCACG ACGGGCTCGT CGACGCGGGC
GGTGCCTACG CCCGGCTCTA CGCCGCGCAG TTCACCGGCG ACACGGCACA GAGCCGCCCC
CGGGCCGGCG CACCCGCCGG ACTGGCCGAC GGCCCGAGAC CGCAGTAG
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| Protein sequence | MKRDATTRAS GPAAAYRALG RSDGNPGTGA GTTRRVWRAI SSQRALLLGT GGLGIVSVVF
TAAGPWLLGR ATDLVLAGSL GQALDPGKTR KDALADLRAD GHGTIAQVLG AIDVVPGQGI
DFGAVGRVLL YAALVYLAAG ACSVAQSWTA NLAVQRVVRH LRADVEAKLS RVPVAYFDGR
RRGEILSRVT NDLDNLGQSL QQVLAQFVIP LFSIVGMLAV MFWISWILAL IALVSAPLSL
LVVIGIGKRA QPYFLEQWRQ TGRLNGHVEE MFTGHGLVKA FGREQEAMEV FVAGNEELTE
ATRRAQSVSS AIQPAMMFIS NLNYVLVAVV GGVRVAAGAL TVGDIQAFIQ YSRQYSQPLV
YLASMAGMVQ SGLASAERVF EILDAPEQSP DPAEVEPLAG DPRAVGLPPV AAGRVAFEDV
SFRYNRDRPL IENLSLVAEP GHTVAIVGPT GAGKTTLVNL LMRFYEIDGG RITLGGVDIA
TMPRARLRAR VGMVLQDTWL FGGTIAENIA YARPGATRED VVAAAVAAHA DRFVRTLPDG
YDTVVDDEDS GISAGEKQLL TIARAFLAEP AVLVLDEATS SVDTRTEMII QAAMARLRKG
RTAFVIAHRL STIRDADTIV VMEDGMLVEQ GTHDGLVDAG GAYARLYAAQ FTGDTAQSRP
RAGAPAGLAD GPRPQ
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