Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Franean1_3233 |
Symbol | |
ID | 5671608 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Frankia sp. EAN1pec |
Kingdom | Bacteria |
Replicon accession | NC_009921 |
Strand | - |
Start bp | 3821500 |
End bp | 3822258 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 641242126 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001507546 |
Protein GI | 158315038 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACCGCT TCACCGATCA GGTCGTCATC GTCACCGGCG GCGGCCAGGG CCTCGGTGCG GCCATGGCCC GCCGCTTCGC CGCCGAAGGC GCCACCGTGG TCATCGGCGA CATCGACAAG GACACCGCCT CCGCCCAGGC CGAGGCGCTG CACGCGGACA TCGGCCGGCC CGCGGAGGGC ACCGGCGTCG ACGTCGCCGA CTCGACCGCG GTCACCGCGT GGATCGACGA CGTGGCCGCT CGGCACGGCC GGATCGACGT TCTCATCAAC AACGCCGGAA TCATCCGGGA CAACCGGATC ACCGACATCA GCGACGCCGA CTGGCACGCG GTGGTCGACG TCTCGCTCAC CGGCAGCTTC CACTGCGCAC GGGCGGTGAT CCCACACATG CGCGCCCGGT CATACGGCCG CATCGTCTCC TTCAGCTCCA TGAGCTGGCG CGGCAACTTC GGACAGGCGA ACTACGTGGC CGCCAAGGCC GGGATCGTCG GCCTGACCCG GGCCATCGCG CTGGAGACCG CCCGCGACGG CATCACCGTC AACGCCATCG CCCCCGGGCT GATCGAGACC CCGATGCTGG CCTCGATGAA CACCGCCGCG CGGGAGAAGC TCATCGGCAA AGTGCCGCAG CGCACCACCG GCCAGCCCGT CGACATCGCC GAAGCCGCGG CGTTCCTCAC CTGTCCGGCC GCCGGTTACA TCACCGGTGT CGTTCTCGAC GTCGACGGCG GTCTCGGTAT CGGCTCGTCC ATCCGCTGA
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Protein sequence | MNRFTDQVVI VTGGGQGLGA AMARRFAAEG ATVVIGDIDK DTASAQAEAL HADIGRPAEG TGVDVADSTA VTAWIDDVAA RHGRIDVLIN NAGIIRDNRI TDISDADWHA VVDVSLTGSF HCARAVIPHM RARSYGRIVS FSSMSWRGNF GQANYVAAKA GIVGLTRAIA LETARDGITV NAIAPGLIET PMLASMNTAA REKLIGKVPQ RTTGQPVDIA EAAAFLTCPA AGYITGVVLD VDGGLGIGSS IR
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