| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3218 |
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| Symbol | |
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| ID | 5671594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Frankia sp. EAN1pec |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009921 |
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| Strand | + |
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| Start bp | 3797695 |
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| End bp | 3798453 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641242112 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001507532 |
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| Protein GI | 158315024 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.672369 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGGCA TGCGGGACTC GGTGGCTGTC GTCACCGGAG GTACGGCGGG CATCGGCTTC
GCCGTCGCTC AGGAACTCGT CGCGCGTGAG GCGAGGGTGG TCATCACCGG CCGTCGTCAG
CAGCAGCTTG ACGACGCGGT CGCCGCCCTG GGCGAGCGTG CCTCGGGGGT ACGCGCCGAC
GTCGCGAGCT CGGCGGAAAT GGATGCCGTG TTCGCGTACG TGAGTGAGCG GCACGGTCGC
CTCGACACGG TCGTCGCGAA CGCCGGCATG GGTCGTCACG CCGAACTCGG TGCGATCACC
GACGAGGATT TCGACCAGAC CTTCGCCATC AACGTGAAGG GTGTGCTGCA CAGCGTGCAG
AAGGCGTTTC CGCTGATGCG CCCGGGCGGG ACGATCACAG TGATCGCCTC GACCGCCACC
ATCCGTGGCT CCTTCGGCCT GAGCCTCTAC GGTGGTTCCA AGGCGGCGGT TCGGAACTTC
GTACGCTCCT GGATCCAGGA GACCGCGGGA TCAGGGATCA GGATCAACGT CATCAGCCCC
GGTGCCGTCG ACACAGAGGC TCTGCGTGAG GCGCTGGCCG GCGCGGTCGG ATCCGACGGG
GTGGAAGCTC AGCTGGCGGC GATCGGATCC TCGAGCCCAC TGGGGCGCAT CGCACAGCCC
AAGGAGATCG CCGCGGCCGC GGTCTTCCTC GCCAGTGCGG AGGCGAGCTA CATCCATGGC
GCCGAGCTCT TCGTCGACGG CGGCACCGCC CAGGTCTGA
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| Protein sequence | MAGMRDSVAV VTGGTAGIGF AVAQELVARE ARVVITGRRQ QQLDDAVAAL GERASGVRAD
VASSAEMDAV FAYVSERHGR LDTVVANAGM GRHAELGAIT DEDFDQTFAI NVKGVLHSVQ
KAFPLMRPGG TITVIASTAT IRGSFGLSLY GGSKAAVRNF VRSWIQETAG SGIRINVISP
GAVDTEALRE ALAGAVGSDG VEAQLAAIGS SSPLGRIAQP KEIAAAAVFL ASAEASYIHG
AELFVDGGTA QV
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