| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Franean1_3162 |
|---|
| Symbol | |
|---|
| ID | 5671539 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Frankia sp. EAN1pec |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009921 |
|---|
| Strand | - |
|---|
| Start bp | 3726566 |
|---|
| End bp | 3726922 |
|---|
| Gene Length | 357 bp |
|---|
| Protein Length | 118 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641242057 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001507477 |
|---|
| Protein GI | 158314969 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.290127 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACCGGCG GAAACCGCCA CGATGTTGAC CAGCTCATTC CGCTGGTCGA GGCGATCCCC
CCGATCCACG GCCGGCGAGG ACGGCCACGC CGCCACCCCC GCGACCTGCT CACGGACCGC
GCCTACGACC ACGTGAAGTA CCGCCGCCAA CTCGCCGCCT ACGGGATCAC TCCGATCATC
GCCTGCCGCG GGAAACCCCA CGACACCAGC CTGAGCCGCC ATTGCTGGCC AGTAGAGCGA
ACCATCGCCG CTCCACCAGT TCCGCCGGCT GCGCACCCGC TGGGAACGCC GCGTCGACAT
CCACCAAGCG TTCCTCAGCC TCGCGTGCTC GATCATCTGC TTACGGAAAC TCATTAG
|
|---|
| Protein sequence | MTGGNRHDVD QLIPLVEAIP PIHGRRGRPR RHPRDLLTDR AYDHVKYRRQ LAAYGITPII
ACRGKPHDTS LSRHCWPVER TIAAPPVPPA AHPLGTPRRH PPSVPQPRVL DHLLTETH
|
|---|
| |