Gene Franean1_3139 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3139 
Symbol 
ID5671517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3693795 
End bp3694544 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content68% 
IMG OID641242036 
Productenoyl-CoA hydratase 
Protein accessionYP_001507456 
Protein GI158314948 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACTCG TCCGTTACGC CGTCGAGCGG GGGTGCGCCG TCATCACGCT CGACTCGCCC 
TGCAACCGCA ATGCATTGTC GGTCCAGCTC ATGCAGGAGT TGTCCACCCA CCTGACTACA
GCTGCCGAGG CGGACGACAT CCGGTGCGTC GTCCTCACCC ACACGGGTTC GACCTTCTGC
GCCGGGGGCG ACCTGGCCGA GGGCGTCCCG GTGCGGAGTA CGGAACGGTT TCGTGACCTC
CTGCGCCAAG TGGTCGAGCT ACCCAAGCCG GTGCTGGGGC GTATCGACGG GCATGTTCGC
GCCGCGGGCA TCGGGTTGGT GGGAGCGTGC GACATCGCCG TGGCGGGGCC GAGGACGACG
TTCGCCTTCA CCGAGGTCCG CATCGGCGTC GCGCCGGCGA TCATCGCGCT GACGACACTG
AGCCGGATGT CGGAACGTGC GGCTGCCCGG TACTGCCTGA CAGGCGAGAC CTTCGACGCG
ACGACGGCTG CGGCCACAGG GCTGGTCACT GTGGCAACAC AGGACGTGGA CGCCGAACTT
GAGCGGATGC TGGAGGCGAT CCGGGTCTGC TCGCCGCAGG GGCTCGCTGA GACCAAGCCG
TTGACCACTC GAGGTGTCCT AGATGCGTTC GATGCCCGCG CTGTAACGTT GCAGCAGCAG
TCTGCGCGTC TCTTCGCCTC TGCGGAGGCG CAGGAGGGGA TGGCCGCGTT CCTGGAGCGG
CGGCAGCCGC GTTGGGCTTT GCCTGCGTGA
 
Protein sequence
MTLVRYAVER GCAVITLDSP CNRNALSVQL MQELSTHLTT AAEADDIRCV VLTHTGSTFC 
AGGDLAEGVP VRSTERFRDL LRQVVELPKP VLGRIDGHVR AAGIGLVGAC DIAVAGPRTT
FAFTEVRIGV APAIIALTTL SRMSERAAAR YCLTGETFDA TTAAATGLVT VATQDVDAEL
ERMLEAIRVC SPQGLAETKP LTTRGVLDAF DARAVTLQQQ SARLFASAEA QEGMAAFLER
RQPRWALPA