Gene Franean1_3120 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFranean1_3120 
Symbol 
ID5671498 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFrankia sp. EAN1pec 
KingdomBacteria 
Replicon accessionNC_009921 
Strand
Start bp3674059 
End bp3674655 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content65% 
IMG OID641242017 
Producthypothetical protein 
Protein accessionYP_001507437 
Protein GI158314929 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACCTAC CCCCACCGAA CCGGACGACC ACCGATCAGC CCGGAGATCG CGACCCTCGT 
CGAGCGGCTC GCGACCGAGA ACACGGCATG GAGGGGTACC AGCGGATCCA GGGCGAGCTC
CTCAAGCTCG GCCACAAGGT CGGCGCGACC ACGATCCGCC GGATCCTGAC GTCCCTCGGG
CTGCCCCCAG CACCGAAACG CCAGACCGAC ACGACGTGGC GGCAGTTCCT GCGCACCCAG
GCATCGATCA TGCTGGCGGT CGACTTCTTC CACGCGGACC AACCTGGATT GATGCGCCTC
TTTGTTGAAT CCGCCGCCGC CGCCACGGAC CCGTCACATC CGGCGCACGA GTTCTACGCA
CGACGCTACG AAGAGCTATC GTCCTACATC GTGTCTCGCC TGGCTGGACC AGTGGAGGCC
GGACGGATCC GCGGAGACGT GCCACTCGAG GACGTTGCGC GCCTTCCGCT CGCTGTGATC
GACGGTCTCC GGATGCAGTG GCTACTCAAC CCGGCGGTCG ACATGGCCAA ACTCGCGGAG
AGTTTTATCC GCCTGTACAT CACGTCATCC ACCCCGGACA CCTTCCCACC CCGTTGA
 
Protein sequence
MDLPPPNRTT TDQPGDRDPR RAARDREHGM EGYQRIQGEL LKLGHKVGAT TIRRILTSLG 
LPPAPKRQTD TTWRQFLRTQ ASIMLAVDFF HADQPGLMRL FVESAAAATD PSHPAHEFYA
RRYEELSSYI VSRLAGPVEA GRIRGDVPLE DVARLPLAVI DGLRMQWLLN PAVDMAKLAE
SFIRLYITSS TPDTFPPR